Teleopsis dalmanni (Malaysian stalk-eyed fly): 119682700
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Entry
119682700 CDS
T09311
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119682700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119682700
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119682700
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119682700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119682700
NCBI-ProteinID:
XP_037952122
LinkDB
All DBs
Position
2:complement(88940900..88942194)
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AA seq
296 aa
AA seq
DB search
MARVVLSEGEKTFIIRAAEKNHRTDGRRNCDYRTILVETGTSICSNGSSRVKLANTDVIV
GIKTEIQKPDLKTPNQGKIEFSVDCSGNADIAFEGRGGDALATELAAALANTYDSPLAFD
LTDLCILSGQHCWKIYVDIMILECGGNLYDAVSLATKAALFNVKIPRVTASLLDAGESEL
TITDNIYDCSRINVESVPIIITVSKIGDACVVDPTAEEELCATATIIMGITIKNGKSFIS
SVQTAGKGSLNKDSFDKCVKIGCEIAEPINSGLMECLKLEEERLGMKRENPTSFLR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagtggttttaagcgaaggcgagaaaacatttataatacgtgctgctgaaaaa
aatcatcgcaccgatggacgcagaaactgcgactaccgaactatattagttgaaactggt
acatctatttgttctaatggttcgtctagagtcaaattagcaaatacagatgttatagta
ggcattaaaacagaaatccaaaaaccagatttaaaaacccctaatcaaggtaaaatagag
ttttcagttgactgttctggtaatgccgatatagcatttgaaggacgtggtggagatgcc
ttagcaactgagttagctgccgctctagcaaatacctatgattcccctcttgcattcgat
ttaacagacttgtgtatattgtccggacaacactgctggaaaatatatgttgatataatg
attttagaatgtggtggaaatctttacgatgcggtgtctttggcaacgaaagcagcttta
tttaatgtaaaaattccgcgtgtaacggcttcactattggatgcaggcgaatccgaattg
acaattacagataatatatacgactgttcacgtataaatgtggaatctgtacctatcata
ataacggtttcaaaaattggtgacgcttgtgttgttgatcccaccgctgaagaagaatta
tgtgctacagctacaataataatgggcattacaattaaaaatggaaaaagtttcatatca
agtgtgcagaccgcaggtaaaggttctttaaataaagattcttttgataaatgcgtaaag
atcgggtgtgaaattgcagagccaataaatagtggattaatggaatgtttaaaattggaa
gaagaacgtcttggtatgaaaagagaaaatcctacttcatttctacgttaa
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