Teleopsis dalmanni (Malaysian stalk-eyed fly): 119683784
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Entry
119683784 CDS
T09311
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119683784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119683784
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119683784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
zf-C2H2_assoc2
Motif
Other DBs
NCBI-GeneID:
119683784
NCBI-ProteinID:
XP_037953573
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All DBs
Position
2:125257200..125260396
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AA seq
658 aa
AA seq
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MADDNNEESWLYGTSNPDSTTNEEERNAVEESTPVIQKTDTTENEAQAAENTQIEIKEEP
ADTGEQDESFSAFEDPAEGMEEDEEAVASAMTAADTTDDGAQNDEEPKSGGVSDEDDDDS
DDDINVVIGDIKAAPSTYNIKQRSNLLAAGGGQDKTKSTSQGGKFSVEDFDGVGVINGVP
AHEFSIDSLEEKPWRKPGADITDYFNYGFNEETWRAYCERQKRMRIVESGVGLASLTQNA
NQNMDRMQDNAIQPVGGSTQTPTINDQIHIPPLGLPPQTTHHGPPPRLSVMTRPPRPTGT
KENVIQVMTAECREYSRTGVLGQLPPFAGGPPEEPFFPEMDAFDYGYEPTQESQWGNDNP
AWVPSGIKELTPGPGMVPPSQMSGPPGMPPGAMGVPPPQLGGPPMRGPPPLMGGMPPPNM
NMGPPPGIGMMMGPNNGPPMRMPMGHTRMMGPHGPHNNLIDPHERNQRRYPPPSNIPLGR
QCLSRQLLEVSNYNPFKKMYKKFHDPLSESSERSDEERERRRRERERDRDRERDRESRSR
RERSRSREKMRRRSKSRDKERDMRERERERDRGRDKDDNREKEEKLRRRSKSRDKERDLR
ERDRERERDREREREREKDDKREKDDKRRRSKSREKRSSKSSRTDKKKSHRKDKEDDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgataataatgaagaaagttggttatatggaacttcaaatcccgattcgaca
acaaacgaggaagaacgcaatgcagttgaagagtctacgccagtaatacaaaaaactgac
accactgaaaatgaagcacaagctgcagagaatacacaaattgaaataaaagaggaacct
gcagatactggtgagcaagatgaatcgtttagtgcttttgaagatccagccgaaggtatg
gaggaagatgaagaagcggtggcttcagccatgactgctgccgatacgactgacgatggt
gcacaaaatgatgaagaacctaaatccggtggagtatcggatgaagatgacgatgattca
gatgatgatattaatgttgtcataggtgatataaaagctgcaccaagtacttataacatc
aaacagagatcaaatttattggctgcgggtggtggacaagataaaacaaaatctacctca
caaggtggaaaatttagtgtggaagactttgatggtgtgggtgtaataaatggagtgccg
gcacatgaatttagcattgattcattggaagagaaaccatggcgtaaaccgggtgcagat
ataacagactattttaattatgggttcaacgaagaaacttggcgtgcatattgtgaacgc
caaaaacgtatgagaattgtggaaagtggtgtgggattagcgagtttaacccaaaatgcc
aatcaaaatatggatcgcatgcaagataatgcaatacaaccagttggtggatcaacgcaa
acaccgactattaacgaccaaatacacattcctccactaggtttgccgccacagacaact
catcatggtcctccaccacgtttaagtgttatgacgcgtcctccacgtcctacaggcaca
aaagaaaatgttattcaagtaatgaccgccgaatgtcgtgagtattcacgtacaggtgtg
ttgggacaactgccaccatttgctgggggaccgcccgaagaaccgttttttcccgaaatg
gatgcatttgattatggttacgaaccaactcaggaatcgcaatggggtaatgataatcct
gcttgggtgccaagtggtataaaagaattaacgcctggtcccggtatggtaccaccttca
caaatgtctggtcctccaggtatgccgccaggtgctatgggtgtgccaccaccgcaatta
gggggaccacctatgcggggaccaccaccattaatgggaggcatgccgcctcctaatatg
aatatgggtcctccaccaggtattggtatgatgatgggtccaaataacggtccaccaatg
cgcatgccaatgggtcatacgcgcatgatgggcccacatggaccacacaataatcttata
gatccacacgaacgcaatcaaagacgctatcccccgccatcgaatataccattaggaaga
caatgtttatcaagacaattgctagaagtatcaaactacaatcctttcaagaaaatgtat
aagaaattccatgatccgctaagtgaatcttctgagcgcagtgatgaagaacgtgagcgt
agaagaagagaacgcgaaagagatcgggatagagagagagatcgtgagagtaggtcaagg
cgagaacgttctcgtagcagagaaaaaatgcgccgtcgttctaaatctcgtgataaggaa
cgtgatatgagagaacgagagagggagcgtgatcgtggaagagataaagatgacaataga
gagaaagaagagaaacttagacgtcgttccaaatctagagacaaggagcgtgatctccgt
gaaagagatagggaaagagagcgagatcgtgaaagggaacgggaaagagaaaaagacgac
aagagagaaaaagatgataagagaaggcgttcaaagtctagagaaaagagaagtagcaaa
tcaagtcgcactgataaaaagaaatcacaccgtaaagataaagaggatgatgaatga
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