Teleopsis dalmanni (Malaysian stalk-eyed fly): 119683889
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Entry
119683889 CDS
T09311
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119683889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119683889
03019 Messenger RNA biogenesis [BR:
tda03019
]
119683889
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119683889
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119683889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCHC_4
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_2
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
119683889
NCBI-ProteinID:
XP_037953689
LinkDB
All DBs
Position
2:complement(55721216..55723425)
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AA seq
294 aa
AA seq
DB search
MDVILANVNNINFKIEKDLMNQCGALLLPFGGMDKSMAAVCQFLDKTGLECDKGSACPFR
HIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMKKMPECYFYSRFNACHNKECPFLHIDPE
SKVKDCPWYDRGFCRHGPNCRHRHVRRVLCINYLAGFCFNGWNCKYVHPTFEIPPLADIA
KEQMQKKTPICHLCGELGHKASMCRKVQDEDRQFKHNTSAKQYVGNLQNLTNRDFNNDKD
EGEENVNTGHSIMTLKISKPIEEVTCYKCGNKGHYANKCPKGHLAFLSNQRNQK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaattttagcaaatgtaaataatataaattttaaaatagaaaaggatcttatg
aatcaatgtggcgcccttcttctaccgtttggtggcatggacaaatccatggctgccgtt
tgtcaatttctggacaaaactggtttagaatgtgataaaggctctgcatgtccatttcgt
catatacgtggcgacagaacaatagtatgtaagcactggctcagaggactttgcaaaaaa
ggcgatcagtgtgaatttttacatgaatacgatatgaagaaaatgccagagtgctacttt
tattctcgattcaatgcttgtcataacaaggaatgtccatttctgcatattgatcctgaa
agcaaagtaaaagattgtccatggtacgatcgtggtttttgcaggcatggtccaaattgt
cgtcatcgacatgtaagaagagtgctttgtattaattacttagctgggttttgttttaat
ggatggaattgtaaatatgtgcatcctacatttgaaatacctccacttgctgatattgca
aaggaacaaatgcaaaaaaagactccgatttgtcatctatgtggtgagttgggtcacaaa
gcttccatgtgccgaaaagtacaagatgaggatagacaatttaaacacaacacaagtgca
aaacaatatgtaggaaatcttcaaaatttaactaacagagattttaataacgataaagat
gaaggagaagaaaacgttaatactgggcattctattatgacattgaaaatatctaaacct
attgaagaggttacttgctataaatgtggcaataagggtcattatgccaataaatgtcca
aaaggacatttagcgtttttatcaaatcagcgaaatcaaaaatag
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