Teleopsis dalmanni (Malaysian stalk-eyed fly): 119684392
Help
Entry
119684392 CDS
T09311
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119684392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_LRWD1
LRR_NLRC4
LRR_5
LRR_EndoS
SPICE
Motif
Other DBs
NCBI-GeneID:
119684392
NCBI-ProteinID:
XP_037954355
LinkDB
All DBs
Position
2:168799734..168803222
Genome browser
AA seq
602 aa
AA seq
DB search
MNLCSSAGATASSTSLASAGKTVSESTTSAGTGGGGALTTHCFGSGSSCAAAHPSSTNTT
TITHPTHSGTGNNNEMPPETRPKVVTVKHPESNKPKPTTKKSKPQQADQDVVKALQRCRD
EGIKRLDLSKSSIFIIPPCVKDCTHLTELYLYSNKISQLPTEIGCLVNLKTLALNENILN
SLPESLQNCKQLKVLDLRHNKLGEIPAVIYKLRSLTTLYLRFNRITAVTIDIRNLTNLTM
LSLRENKIRELGASIGALVNLTTLDVSHNHLEHLPEEIGNCINLSALDLQHNELLDIPET
IGNLKNLVRLGLRYNRLTSIPTSLKNCKCMDEFNVEGNGITQLPDGLLASLSALTTITLS
RNSFQSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENALTALPLDVG
TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNLLKKIPNTIGNLRKLRILDLEENR
IEVLPNEIGLLHELQKLILQTNQITVLPRTIGHLSNLTHLSVSENNLQYLPEEIGSLENL
ENLYINQNPCLEKLPYELALCQNLKYLNIDKCPLGTIPPEIQAGGPSLVLQWLKMHSPYR
QM
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtgttcctctgcaggtgctacagcatcgtcaacgtcattagcatccgcgggt
aaaacagtaagtgaaagtacaacatcggcaggcactggcggtggcggtgctttgacaaca
cattgttttggcagtggcagcagttgtgctgccgcccatccatcatccacaaacacaaca
acaataacacatccaacacacagtggcactggtaacaataacgaaatgccacccgaaacg
cgtcctaaagttgtaactgtcaaacatccagaatcgaataaacccaaacctacaactaaa
aaaagcaaaccacagcaagcagaccaggatgtggtgaaagcgctacagcgttgcagagat
gaaggcattaaacgtttggatcttagtaaatcatcaatattcataataccaccatgcgtt
aaagattgcacacaccttaccgaactttatctgtatagcaacaaaataagtcaactgccc
acagaaattggttgtttagttaatttgaaaacacttgcactcaatgaaaatatactcaat
tcgctgccagaatccttacagaactgcaaacaattaaaggtgctggatttaaggcataat
aaacttggagaaattccggcagtcatatataagttgcgttcgctaacaacgctttacttg
cgtttcaatcgtattaccgccgtaactattgatatacgtaatcttaccaatctgactatg
ttgagtttgcgtgagaataagatacgtgagctgggtgcatcaataggtgctttagtaaat
ttgactacactggatgtatcacacaatcatctggaacatctacctgaagaaatcggtaac
tgtataaatttgagcgcattagatttacaacacaatgagctacttgatataccggaaaca
attggtaacctaaaaaatttagtgcgtttgggattaagatacaaccgtttaacatctata
cccacatcattgaaaaattgtaaatgcatggatgaatttaatgtggaaggcaatggcatt
actcaactaccagatggattacttgcgagtttaagcgcacttacaactataacactttca
cgaaattctttccaaagctatcctacaggtggaccagcacagtttaccaatgtgtatagc
attaatcttgaacataatcgtattgataaaattccctatggtattttctcacgagctaaa
ggtttgacaaagttgaacatgaaagagaatgcactgactgctctaccactcgatgtgggt
acatgggttaatatggttgaactgaatttggccacaaatgctttgcaaaaactaccagac
gacataatgaacttacaaaatctcgaaatactcatactatcaaataacttgctcaaaaaa
ataccaaatactattggaaatttgcgcaaattacgtatcctagatctggaagagaatcgt
atcgaggtgttaccaaatgaaattggtcttctgcatgaactgcaaaaattaattttacaa
acgaatcaaattacggtattaccacgcaccattggacatctcagtaatttgacgcatttg
tcagtgagcgaaaataatctacaatatttacctgaagagattggctcattagagaattta
gaaaatctctacattaatcaaaatccctgtttggagaaattaccatatgaattagcgttg
tgtcagaatttgaaatatttgaatattgacaaatgtcctttgggcacaataccaccagaa
attcaagctggcggaccatcgctagtgttgcaatggctaaaaatgcattcaccttacagg
cagatgtga
DBGET
integrated database retrieval system
