Teleopsis dalmanni (Malaysian stalk-eyed fly): 119684695
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Entry
119684695 CDS
T09311
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119684695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119684695
03019 Messenger RNA biogenesis [BR:
tda03019
]
119684695
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119684695
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119684695
U7-dependent histone pre-mRNA processing factors
119684695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
119684695
NCBI-ProteinID:
XP_037954721
LinkDB
All DBs
Position
2:157640080..157644367
Genome browser
AA seq
1171 aa
AA seq
DB search
MDGIIGRSQFLGDAANLFMNEETVNARSKIVSWLNELGTQTDSKIKCELLAKIQEIILGA
GVELLDEFLDHILSLSQDSNVDVRKQVINFIEKACKVKINLLPQFINVIPLLLRDRSPHV
IKRMIQVSGMIYKNGLQWICHNTEYSDSIEQAWNMLSLVKAQVLDFIDNDNEGVRTNAIK
FLENVIVAQSYKDEDTQKREGDFSLEDIPENLKIIKHQKLEDEALNIFSIILQYHAATHI
SAVNLNTCTGSLCTIAKLRPCFMGPVIKAFKNLSANFPPTLSDSQINSVRKSLKMQALML
LKNRGSYEYQVILRQLLLDLGASQNEIQRSIPKMDKQEQQRRQKRILENATSSLSKRMRR
IEEHENMDINKNASNQVEMEVDEEEVEKQRTKCIRVNEKFLAEQLRSVDTVVNLIIRFLP
NIPGEVPEHFLNEYEPIRDMSTQLQVANISKAMALQMTAHKVGPGAAAFTKELPMRPVEL
QTQMESLAVNDNINESLDQPMSSVDEDQLRKEEATKKLRENMERLKGEQELIERMKQRAK
TLKLQEITKPFSRSVKEKFLLDAVKRILYAERQCISGGVSAKRRKIVTVIAATFPDNVRY
FIFEFIMMDIKQRIDLAFSWLYEEYCLLQGFTRHCYVKSENRPDYAYNELLSQIVERIIT
NCDFKDKILLLRRFFLEAPMLPDDALNKLIQMSFTEEYTNYSMELLKDLAIWRPPRKNKL
INVLLGFCVHERVDVRERAMDQIIVLYQQHKVLPNRIEDFALQWISHLEKETPPASIFLT
EYGRPEVEVAWKEETAKICLGVLLKLLPCNTKLFLKKLSEVFAITTQDLKRTILRSIDSA
IKKLGPENQELLNLIEQCPKGVETLLIRMIYILTDRVYPINTELVRHARDMYSNKVKDAR
VLIPVLSGLTRQEILIALPKFLKLNQVVVREVFNRLLGIGAEYANQRVATTPPEILVALH
TIDLSVCDLKSVLRGTSICLSEKDVYTQEVMIGVLQQLVEVVPLPTLLMRTIIQSLTLYP
TLANFVLNLLQRLILKQVWRQKVIWEGFLKCIQRLKPQSLPVLLHLPAKQLVDALQQCPD
LRVPLLEYAESIQDEPMSGITPQIMDIITGKTVDVFVTDETGGYITIDNIKKEKEEPDEP
IAISTVSSFTLVQPARVGYSDPSQPLPPGED
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattattggacgcagtcagttcttaggtgacgccgccaacttatttatgaat
gaggaaacggttaacgcgcgttccaaaattgtaagctggttaaatgaattaggcactcaa
acggatagtaaaattaagtgtgaacttcttgcaaaaatacaagaaataatattgggtgct
ggagttgaattgctggatgaattcctggaccacattctatccttatcacaagactcaaat
gtagatgttcgaaaacaagttataaattttattgaaaaagcatgcaaagtaaaaatcaat
ttattgccacaatttataaatgttataccattactactgcgcgaccggtcgcctcatgtc
attaagcgtatgatacaagttagtggtatgatatataaaaatggtttgcagtggatatgc
cataatacagagtatagcgacagtatcgagcaagcttggaatatgttaagtttagtgaaa
gctcaagtacttgattttattgataacgacaacgaaggtgtacgcactaatgctatcaaa
tttcttgaaaacgtcattgttgctcaaagctataaagatgaagatactcaaaagagagaa
ggtgatttttcgttagaagatatcccagaaaatttaaaaataatcaaacaccaaaaactg
gaggatgaggcattgaacatatttagtataatattgcaatatcatgctgctacacatatt
tcagctgttaacttaaatacttgtactggaagtttatgcactatagccaaattgagacct
tgctttatgggtccggttataaaagctttcaaaaacttgagcgctaacttcccaccaacg
ttgtcagattcccaaataaattctgtacgcaaaagtcttaaaatgcaagctctaatgtta
cttaagaaccgtggctcctatgaatatcaggtcatactgcgtcaattgctactggattta
ggggcatcgcaaaatgaaatacaacgatcaataccaaaaatggacaaacaagaacaacag
cgacgtcaaaaacgtatattagaaaatgcaacgtccagtttaagcaaacgaatgcgtaga
attgaagagcatgaaaatatggatattaataaaaatgcaagtaatcaagtagaaatggaa
gtcgatgaagaggaagtggaaaaacaacgtacaaagtgtatacgtgttaatgaaaaattt
ttagcagaacagttacgttctgtagataccgttgtaaatttaataattcgattcttacca
aatattcccggtgaagttccagaacattttctaaatgaatatgagcccatacgagatatg
tcaacacagttacaagttgctaacatatcgaaagcaatggccttgcaaatgacagctcat
aaagttggtccaggagccgcagcttttacaaaggagctgccaatgagacctgtggagtta
cagacacaaatggaatccttagcagttaatgacaacataaatgaatccttggatcaacct
atgtcatctgtagatgaagatcagttgcgtaaagaggaagctactaaaaaattgcgcgaa
aatatggaacggcttaaaggcgagcaagaactgatagagcgcatgaaacaacgtgcaaaa
actttaaaactgcaagaaatcaccaagccattttcacgttccgttaaagagaaattttta
cttgatgctgttaagcgaatactttatgctgaacgccagtgtatatcaggtggtgtatct
gctaagcgacgcaaaatcgttactgttattgcggccacttttccggataatgtgcgctat
tttatatttgaattcattatgatggatattaaacaacgtattgatttagcattctcatgg
ttatatgaggagtactgcctgttacagggtttcacgcgtcattgttatgtgaaatctgaa
aatcgtccagattatgcttacaacgaattgttaagtcaaattgttgaacgaattattaca
aactgtgattttaaagacaaaatacttttgctacgtcggttcttcttagaagctcctatg
ctaccagatgatgcacttaataaactgatacaaatgtcttttactgaagaatatacgaat
tattccatggaattgctgaaggatttagctatatggcgaccgccccgtaaaaataaactg
ataaatgttttattaggattttgtgtacatgagcgagtagatgtacgtgaacgggcaatg
gatcaaataattgtcctatatcagcaacataaagtattgccaaatcgtattgaagatttt
gcattgcaatggatatctcatctagaaaaagagactcctcctgcaagtatatttttaact
gaatatgggcggccagaagtagaagtagcctggaaggaagaaacagctaagatttgtttg
ggtgtactactaaaattgcttccatgtaacacaaaacttttcctgaagaaattgagtgaa
gtcttcgctataaccacgcaggatttaaaacgtaccatactgcgtagtatagattcggct
ataaaaaaattaggacctgagaatcaggaactgcttaatctaattgagcagtgcccgaaa
ggtgttgaaacacttttgatacgcatgatatatattttgacagatcgcgtttatccaatc
aacacagaacttgtaagacatgcaagggacatgtacagtaataaagttaaggatgcacgc
gtacttatacctgttttgagtggtcttacgaggcaggaaattcttattgctttaccaaag
tttttaaaactgaatcaagttgtagtaagggaagtatttaaccgtttgttgggtattggc
gcggaatatgctaatcaacgtgtagccaccacaccaccggaaattttagttgcactacat
acaatcgacttaagtgtttgtgatttaaagtcagtcttaagaggtacatcaatatgcttg
tccgaaaaagatgtttacactcaggaggtaatgattggagtgttacaacagttagtggaa
gtagtaccacttcctacattgttaatgcgcacaattatacaaagtttaacgctatatcca
acgttagctaattttgttttaaatttattacaacgtttaatattaaaacaagtttggcga
caaaaggttatctgggaaggattcttaaaatgtatacaacgtcttaaaccgcaatcatta
ccagtattattacacttaccggctaagcaactggttgatgccttacagcaatgcccggat
ttgcgggtcccactgttagaatatgctgagagtatacaagatgagcccatgagtggtata
actccacaaataatggatataatcactggaaaaacagttgatgtttttgtgacggatgaa
actggtggatatataacaattgataatataaaaaaagaaaaggaagaacccgatgaacct
attgcaataagtacagtgtcttcgtttacattagtacagcctgcgcgtgttggatattca
gacccttcgcaaccgctgcctccgggagaagattaa
DBGET
integrated database retrieval system
