Teleopsis dalmanni (Malaysian stalk-eyed fly): 119684985
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Entry
119684985 CDS
T09311
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119684985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tda03041
]
119684985
03009 Ribosome biogenesis [BR:
tda03009
]
119684985
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119684985
Spliceosome [BR:
tda03041
]
Complex A
U1 snRNP components
U1 related factors
119684985
Complex B
119684985
Ribosome biogenesis [BR:
tda03009
]
Eukaryotic type
Pre-60S particles
Helicases
119684985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
TTC3_DZIP3_dom
Motif
Other DBs
NCBI-GeneID:
119684985
NCBI-ProteinID:
XP_037955078
LinkDB
All DBs
Position
2:complement(207823087..207833368)
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AA seq
786 aa
AA seq
DB search
MFKILVQNLYKSSCETLSTPAAATACVKNLLISSPVTKNTSSSQRRHFLFSSTNRNQIFA
FPTINSSEVKEPKICTKLNQQQQSKKQIYQKVFNHSGIQQSSISSNFYRGFHLTCIRLLE
AETLPAEKQASKTKRNSLYIDPDEEDYLDTMAPHDKNFSGSRGGARGGDDRRGGGGGGGS
GGSGAAKSGGSRFGGESSYHGVRNGRIEKNRDRRPMGGGNGGRNEGGNYGGGSYGGGSYG
GNSYGNSGGYGGGGYGGAKSNNNTGGGQDLTLTSVDFSNLAPFKKNFYQEHPGVANRAPY
EVQRYRDEHEITVRGNAGNPIQDFSEAYFPDYVTKEIRRQGYKTPTPIQAQGWPIAMSGQ
NCVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVASEFGS
SSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLAAGATNLKRCTYLVLDEADR
MLDMGFEPQIRKILSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYVQINIGSLELSANHN
IRQVVEICEEHDKEDKLKDLLSEIYDTSENPGKIIIFVETKRRVDQLVRFIRSFGVRCGA
IHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQSSEDYIHRIG
RTGRSNTKGTSYAFFTKNNVKQSRALVDVLKEANQDINPALENMARNTRGGDNGRSRYGG
GGNSRFSGTFRKGAIGGGGGGRGYGNNNGYSNNHRSNGYGGNNENGYSRNGNSSSNGGGS
RHTRFN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatattagtacagaatttatataaaagctcgtgcgaaacgctttcgacacct
gcagctgctactgcttgtgtgaaaaatttattgatttcatcaccagtaacaaaaaatact
tcttcatcacaacgacgccattttcttttttcttctacaaacagaaatcaaatttttgct
tttccaactatcaacagcagtgaagtgaaggagccaaaaatctgcacaaaattgaatcag
cagcaacaaagcaaaaagcagatttatcaaaaagtattcaatcacagcggaatacagcag
agctccatcagtagcaacttctatagaggatttcatctaacctgtataagactcttagaa
gcggaaacacttccagcggaaaagcaagcatctaaaaccaaaaggaatagtttatatata
gacccagacgaagaagattatttagatacaatggcacctcatgataaaaatttcagtggt
tcacgcggaggagcacgtggtggtgatgatagacgtggtggcggtggtggtggtggttca
ggagggtctggcgccgctaaaagtggtggttcacgatttggtggagaatcatcgtatcat
ggtgtacgtaatggtcgcattgagaaaaatcgtgatcgtagaccaatgggtggtggtaat
ggtggacgtaatgaaggcggtaattatggcggtggtagctatggcggcggcagttatggc
ggtaatagctatggcaatagcggtggttatggtggtggcggctatggtggtgccaaaagc
aataacaatactggtggcggtcaagacttaacactcaccagtgttgatttttctaatttg
gcaccatttaagaagaatttctatcaagaacatccaggtgtagccaatcgtgcgccatat
gaagtacaacgctatcgtgacgaacacgaaatcactgtccgtggtaatgccggcaatccg
atacaagattttagcgaagcatattttcctgactatgtaaccaaagaaattcgtcgacaa
ggttataagacaccaacaccaattcaagctcaaggttggccaattgctatgagtggacaa
aattgtgttggtatagccaagacaggatctggcaaaacattgggttacattttacccgct
attgtacacattaataatcaacaaccattacaacgtggcgacggacccatcgctttagtt
ttggctccaacacgagagttggcacagcaaatacaacaagtcgcttccgaatttggttcc
tcatcgtatgtgcgtaatacttgtgtatttggtggcgcaccaaagggcggacaaatgcgt
gatttgcaacgtggttgtgaaattgtaattgcaacacctggccgattaatcgatttcctc
gctgctggcgcaactaatttaaagcgttgtacttatctggtattagacgaagctgatcgt
atgttggatatgggtttcgaaccacaaatacgtaaaattctctcacaaattcgccctgat
cggcagacacttatgtggtccgctacttggcccaaagaagttaaacaattggctgaagat
ttccttggcaattatgtgcaaattaatattggttctctggaattgtcagccaatcacaat
atacgtcaagttgttgaaatttgcgaggaacacgataaggaagataaattaaaagatttg
ctatctgaaatatatgacacaagtgaaaatcctggtaaaattatcatattcgttgaaaca
aaaaggcgcgtagaccagttggtgcgtttcatacgcagctttggcgtacgctgcggcgct
atacacggcgataagtcacaatccgaacgtgatttcgtgttgcgcgaatttcgttctggt
aaatctaacattttggtagccactgatgtagccgcccgtggtctcgatgttgatggcatt
aagtatgtcattaattttgattacccacaatcatctgaggattatatacatcgtattgga
agaactggtcgttcaaatacaaaaggcacttcatatgcattctttaccaaaaataatgtc
aaacaatccagagctttggttgatgtgttaaaagaggctaatcaggatataaatccagca
cttgaaaatatggcacgtaatacacgtggtggtgacaatggtcgttcgcgttacggtggt
ggcggtaattcacgtttcagtggcacattcagaaagggtgccattggtggtggcggtggt
ggtcgtggttatggcaataacaacggctacagcaataaccaccgttcaaatggctatggt
ggcaacaacgaaaatggctacagcagaaatggaaacagcagtagtaacggcggcggttca
aggcatacacgttttaactag
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