Teleopsis dalmanni (Malaysian stalk-eyed fly): 119685592
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Entry
119685592 CDS
T09311
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119685592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119685592
03036 Chromosome and associated proteins [BR:
tda03036
]
119685592
Enzymes [BR:
tda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119685592
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119685592
mRNA degradation factors
5'-3' decay
Decapping complex
119685592
Chromosome and associated proteins [BR:
tda03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119685592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA
Motif
Other DBs
NCBI-GeneID:
119685592
NCBI-ProteinID:
XP_037955849
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All DBs
Position
2:complement(177513157..177515028)
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AA seq
441 aa
AA seq
DB search
MTKDHQMVATGDDMRWKSKLKIPPKDTRFKTSDVTDTRGNEFEEFCLKRELLMGIFEKGW
ERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTREL
ALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVANM
SHCKVLVLDEADKLLSQDFQGMLDHVILKLPKNPQILLFSATFPLTVKNFMEKHLREPYE
INLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITEL
GYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAET
YLHRIGRSGRFGHLGIAINLITYDDRFDLHRIEKELGTEIKPIPKIIDPALYVANIGLNS
TEPGTNNELNNSANEEGNVSK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatcatcaaatggttgcgacaggagacgacatgagatggaaatcaaaattg
aagattcctccaaaagacacacgctttaaaacgagtgatgtcaccgacactcggggaaac
gaatttgaagaattttgcttaaaaagagaactgctgatgggcatttttgagaaaggctgg
gaacgtccatcaccgattcaagaagcagcgattcctatagcgctaagcggtaaggatgta
ttagctcgagcgaaaaatggaacgggcaaaactggtgcatattgcatccccgttctagaa
caaatagaccctacaaaagattatatacaagcattagtaatggtgccaacaagagaactt
gccttacaaacttcacagatctgcatagaactcgcaaaacatttggacataagagtaatg
gtgacaactggtggtacaatattgaaggatgacatcttacgtatataccaaaaagtacaa
ttgatcattgcaacgcctggccgcatactggatttgatggataaaaaagtggccaatatg
tcgcattgtaaagtgcttgttttagatgaagccgacaaacttttatcacaggatttccaa
ggcatgctggatcatgttattttaaaattgccgaagaatccgcaaattctactattttcc
gcaacatttcctttgactgttaaaaattttatggaaaaacatttgcgcgaaccttacgaa
ataaatttaatggaagagctgactcttaaaggcgtaacgcaatactatgcttttgtgcaa
gaacgccagaaagtacattgccttaatacattattttcaaaattacaaataaatcaatcg
ataatattctgtaactcgacgcaacgcgtggaactgcttgctaaaaaaataacggaactc
ggatactgttgttattatatacatgctaaaatggcgcaagctcacaggaatcgagtattt
catgattttcgacagggtttatgcagaaatcttgtgtgttcggacttatttacgcgaggt
attgatgtacaagccgttaatgttgttatcaattttgattttccacgtatggctgaaacg
tatttacatcgtataggtcgttcaggaagattcggccatttaggtattgccatcaatttg
ataacctacgacgacaggttcgatctgcatagaattgagaaagaactgggcaccgaaatt
aaacctataccgaaaattattgatccagcattatacgtagctaacattggccttaactct
acggaacccggtaccaacaatgaacttaataactcagcgaacgaggagggcaatgttagc
aagtaa
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