Teleopsis dalmanni (Malaysian stalk-eyed fly): 119687214
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Entry
119687214 CDS
T09311
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119687214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119687214
03032 DNA replication proteins [BR:
tda03032
]
119687214
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119687214
mRNA cycle factors
Common to processing body (P body) and stress granule
119687214
DNA replication proteins [BR:
tda03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
119687214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
119687214
NCBI-ProteinID:
XP_037957394
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All DBs
Position
X:57488223..57496352
Genome browser
AA seq
1219 aa
AA seq
DB search
MDFICSSGSSNNSNGYSEQITSNKVENEKTAAKGITSEIKAIYRSLYIVAKQLDDGKKNL
SSIAQLFAPAIQQLRVKLVNLCKDLVFKDHQVIGKKAREIMWRKGYYEFIAYAKRNWHRE
YKDASPSEIQEAYKKLECFLLGGIRNYKRVSAKMEEVYDLDLKNLIDFKAISDSINYEIS
DNNLNDCYDTDMIDMTNIVADKSLEAISFALDTIHSSLLSLGDLHRYFLDFHIENRIHMP
KQQAAKYYFEAFKLNSSVGMAQNQLGTLYYGQNYDLDSIYHYLYSLVCIMPFELSENNVC
KLFSAHSAYLGGLDPEKIEFCLEDFYARFYLVVDIFFFDKEVPDFNSLCHCVLVDLRKVL
CSKAFNITDMSIFKIVSILFFCLSKLKMINSQKVYSLNAFLVAVCSDLIDACIVNLEQTI
LTKSSEIEDFQTMYMKKFDEFDMSVRKSRNEYKNWMAHFDESDRKEKKPIKLLSHRGVSS
DSRESQLSHDEFVLKTQDSNKQSMDGGDKNLDPISTRSSDEAKESDLKTPLSCKSKKRGM
KLRRRRRKIVESDDSSCYDTQSEMDTDFSTDEEDYTDLSSNFDTDFSDIEADPVGFDSYD
RYDRYERDNCDDEFIQNSINSDIKSKLPIMTPTCKDSNANDDMLTFSDNDEVVVEEEHII
YPINPEKIQQVQRTNSAEVDSEELLHSFEVLQLSSNNGALNFKCSDIEEVENDNANIRKN
KENRDVSPKYSEEPPKKLVYRNKYMKINPNVVVNFAINEPTLRALKILFDWLRLNHEILF
GCYHSNPEFVHKIMKLLNYCNIDIFTRKVYFEREFLQIPNVRTALTDLFDVRANIPLSED
FVFKNFDIFQATQITFDWEVTQRENITNEEESILRIFKMVDFGFFICKQKKFSYRFCVKS
RRFTETAKKKREEKKSSRRRERRTAKNATRKRTEGRTRRYSDRKNGIIRKSYTSNEEKDT
VEEGKKLPRKGYLRNRNSEKLANASASGATNTSASTTNSAICEKVTMQSSSGADEERSET
MNRKCEIMGKLWLKNEVATLEEELRLSSESIVTPFIVLDTKALTEFTDVVKNLLKTKQFI
ILIPNSVINDLDDLKKRSENARNVIRWLEHEFTVGNRFLRAQRDNENLPLPLLKLPKKMD
RDTFTFIQIVNFCNHLVANYTDGKCPEFGINVVTYLSGDTIPEKQRHITKFCLAGLLDAI
PIRYEQISNYYAKLKLNKK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggattttatatgcagttcgggaagttctaataactccaatgggtacagtgaacaaata
accagtaacaaggttgaaaatgagaagacagccgcgaagggcattacatcggaaatcaaa
gcaatatatcgatctctgtatattgtggcaaagcagttggatgatggaaagaagaatctc
tcgtctatagcacaacttttcgctcctgctatacagcagttacgtgtgaaattagtaaat
ctatgcaaggatcttgtttttaaagatcatcaagtcatcggaaagaaggctcgtgagatt
atgtggcgtaaaggttactatgagtttattgcgtatgctaaacggaattggcatagagaa
tataaagatgcctcacctagtgaaatacaggaagcgtataaaaaattggagtgcttcttg
ctcggtggtataaggaattataaacgcgtttcagctaaaatggaagaggtttacgatttg
gacttgaaaaatttaattgacttcaaagctatcagtgacagcataaattatgaaatttct
gataacaatttaaatgattgctatgatactgatatgattgatatgactaatatcgttgcg
gataaaagtttggaagcaatatcctttgctttagacacaatacactcgtcattgctaagt
ttgggtgacttgcatcgctactttttggatttccatattgaaaatcgaattcatatgccc
aagcaacaagcagctaaatattattttgaagcatttaaacttaactcatcagtgggtatg
gcacaaaaccaattaggaaccttatattatggtcaaaactatgatttggattctatttat
cattacttgtattcactcgtatgcataatgccatttgaattaagtgaaaacaatgtttgt
aagctattctcggctcattctgcttatttgggtggattggatccagagaaaatcgaattt
tgcctagaagatttttatgctcgtttttatttagtagttgatatttttttctttgacaaa
gaagtaccagattttaattcactctgtcactgtgtattagtagatttacgtaaagtgctt
tgctcaaaagccttcaacatcactgacatgagtatttttaaaatcgtttcaatacttttc
ttctgtttgtcaaagctaaaaatgatcaattctcaaaaggtttactcattgaacgcgttt
ctcgtggctgtatgctctgatttaatagatgcctgcattgtgaatttggagcagacaatt
ttgacgaaatcttcagaaattgaggactttcaaacaatgtacatgaaaaagtttgacgag
ttcgacatgagtgtaaggaaatcgcgtaatgagtataaaaattggatggcacattttgac
gaaagtgatcggaaggagaaaaagcctattaagttactaagccatagaggagtatcatct
gattcgagagaaagtcaattatcgcatgatgaattcgtgcttaaaactcaggatagcaat
aaacaatccatggatggtggtgataaaaatcttgatccaatttctacacgttcaagcgat
gaggccaaggaaagtgatttgaagacaccactctcgtgcaagagtaaaaaacgcggtatg
aaattaagacggcgccgtcgtaaaatagttgagtcagatgatagctcatgctatgacaca
caaagtgaaatggatacagatttctcaactgatgaggaagattatactgatctaagttct
aacttcgatactgattttagtgatattgaagctgatcctgtgggttttgatagctatgat
agatatgaccgatatgaacgtgacaattgtgatgatgaattcattcaaaacagcattaat
tctgatattaaatctaaactgcccatcatgactccgacttgtaaagacagcaatgcaaat
gatgatatgctcactttctctgataatgacgaagttgttgttgaagaagaacatattata
tatccaattaatcctgaaaaaatacagcaagtgcagcgtactaattcagcagaggttgat
tcggaagagttgctccatagctttgaagttttacagttaagtagcaataacggagcattg
aactttaaatgttcggacattgaggaggttgaaaatgataatgctaatatacgcaaaaat
aaggaaaacagagatgtgtcacctaaatattcagaagaaccacccaaaaagcttgtatat
cgtaataaatatatgaagataaatccaaacgtagttgtcaatttcgcaataaatgaacca
accttacgggccttaaaaattttgttcgattggttgcgtttgaaccacgaaatattgttt
ggatgttatcactctaatccagagttcgtacataagattatgaaattgcttaattattgc
aatattgatatatttacgcgtaaagtatactttgagagagaattcttgcagattcctaat
gtacgcacagcattaactgatttatttgatgtacgtgctaatatacccttgtcggaagat
tttgtgtttaaaaattttgacattttccaagcaactcagataacatttgattgggaagtt
actcaacgtgaaaatatcaccaatgaagaagagagtatattgcgcatttttaaaatggtt
gattttggcttcttcatatgcaaacaaaagaagtttagctatcgtttctgtgttaaatct
cgtcgtttcactgaaacggctaaaaagaagcgtgaggagaagaagtcttcccggcgacgt
gaaagacgtactgccaagaatgctactcgcaaacgtaccgaaggacgtactcgtcgctat
tctgatcgtaaaaatggtattatacgtaaaagttatactagcaacgaagagaaggataca
gttgaagaaggcaaaaagttgccacgtaaaggttatctacgtaatcgtaattctgaaaaa
ttggcaaatgcaagtgcttccggcgctaccaatacatcagcgtcaacaactaatagtgct
atttgcgagaaagtgacaatgcagtccagcagtggagctgacgaagagcgttcagaaacg
atgaatcgtaaatgcgaaataatgggtaaattatggttaaaaaatgaagtagctacactt
gaagaggagttgcgtttaagtagcgaatccattgttactccgtttattgtcttggacacc
aaggctttgacagaatttactgacgttgttaaaaatttattaaaaactaagcaatttatt
atacttattcccaattcagtaattaatgatttggatgacttaaaaaagcgtagtgaaaac
gctcgcaatgttattcgttggttagaacatgagtttactgttggtaatcgctttttacgt
gcccagcgtgacaatgaaaatttgcccttacctcttctaaaattgccaaagaaaatggat
cgggatactttcaccttcatacaaattgtaaacttttgcaatcatcttgtggcaaactac
accgatgggaaatgccctgagtttggcattaatgttgttacatatttatctggcgataca
attcctgaaaaacaacgtcatataacaaaattttgtttggccggacttttggatgccata
cctatacgttatgagcaaatatcaaactattatgctaaattaaaattgaataaaaaatga
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