Teleopsis dalmanni (Malaysian stalk-eyed fly): 119687355
Help
Entry
119687355 CDS
T09311
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda04140
Autophagy - animal
tda04142
Lysosome biogenesis
tda04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119687355
04140 Autophagy - animal
119687355
04148 Efferocytosis
119687355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tda04131
]
119687355
Membrane trafficking [BR:
tda04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119687355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
VPS18_solenoid_2nd
zf-RING_Vps41
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_HPS5
zf_RING_Vps8_fungal
WD40
TPR_7
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR19_2nd
HIR3_TPR_2
WD40_Prp19
zf_RING_Vps8
Beta-prop_EML_2
FF_URN1
zf-RING_UBOX
Vps39_1
Motif
Other DBs
NCBI-GeneID:
119687355
NCBI-ProteinID:
XP_037957571
LinkDB
All DBs
Position
X:complement(74915304..74932601)
Genome browser
AA seq
846 aa
AA seq
DB search
MAEKEKENENANSDADSNSIEEEAEPKFKYKRLENNVKEILNKDVVTCCAVHSKFLIFGT
FLGRVYLLDHKGYAVKSNLTDGVTNFTHTVAVNHIDVDVKGSYVASCSDDGLVRITGLFS
DENNYDLNIGKSIKAVALDPDPKSAAIKRFIIGDDKLTLYERNFLKKLKSTVLSTAEGYV
LAVCWSGNFVAWASYVGVHVYDLNEKCSLGLMKWEQPINARLENFRCNFRWANSTTLLIG
WVDTIRVCVIRKRNAIDAISRVLPVFIVDPISTIPTTFYICGLAPLSKEQLVVLGYPKEK
DANRKALRPVLCVMDYKKNNSGEMCTDSLSLRGYQEYTVNDYSLSCLLEENRFIIVAPKD
IVVASPYDTDDRVQWLIEHRKFEEAMNVITNYGGKLSLLTVGRLYINYLLSLKRYDEAAK
LCLHVLGNKKALWEEEIYKFVKCQQLRSVSAYLPTLKECKLEAYVYEMVLFEFLKFDPKG
FLNLIKNWPSHLYDCTAVINAIYSNFRKENSNELLEALAILHIYKKDYENALKMYLKLMN
KDVFILISKYDLYSTIHKRIIPLIELDEECAFKLLVDKEKIPPEVVVEQLEQNQEYLFRY
LKALDRVDKRGTFHSKLVQLYAKFERDQLLLFLKRSNHYAIQEALDICKRKLFYPEMVYL
LGQMGNTAEALNIIIDKIKDIEMAIEFCKEHDDSDLWNVLIDESVNNPEIVTKLLDGIVG
YVNPEAVVNKIKAGQKIPGLRSAVVKMLWEYRLQLKVLQGCSKMQLCDYYKNHAELIQQQ
RRGLSVTYNNKCEICQRLLVNKDTIPHNAVITFNCGHCFHETCVSGRYISECCHRCKYSD
EDDNNQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaaggagaaagaaaatgagaatgcgaatagcgatgcagactcaaatagcata
gaagaagaagcggaaccgaagtttaaatataaaagacttgagaataatgtgaaggaaata
ttaaataaagatgttgttacatgttgtgcagtacactcaaagtttctgatatttggtact
tttttgggacgtgtctatttgttagatcacaaaggatacgctgttaaatccaatcttaca
gatggtgtaactaattttactcataccgtagctgtgaatcatattgatgttgatgtaaaa
ggcagctatgtggcatcctgctccgatgatggcctggttcgcataactggcctttttagc
gatgagaataattatgacttaaatattggcaaatcaataaaagccgtagctttagatcca
gatccaaagtcagctgctataaaaagatttattattggtgatgacaagctgacgctatac
gaaagaaactttctaaagaaactaaaatcaactgtgctaagtacagcggaaggatacgta
cttgcggtgtgttggagtggtaattttgtagcttgggccagttacgtaggtgtacatgtt
tacgatttaaatgaaaagtgttcactaggtttaatgaagtgggagcaaccaataaatgct
cggctggagaattttcgttgcaattttcgctgggcaaactcaactacattacttattggt
tgggtcgatacaatacgcgtatgtgtcatacgtaaacgaaatgcaattgacgctatatcc
agagtattgccagtatttattgttgatcctatttcaacaattccaacaacattttatata
tgtggcctagctcctttatcaaaggaacaattagttgtgctaggttatcccaaagaaaag
gatgctaaccgtaaagcattgcgtccagtattatgtgtaatggactataaaaaaaataat
agtggagaaatgtgtacggatagcctatcgttacgtggctatcaagaatacacggttaat
gattatagtttaagttgtttattagaagaaaatcgttttattattgttgcaccaaaggat
atcgttgtagctagcccttacgatacggatgatcgtgtgcaatggctgattgaacatcga
aaatttgaagaagctatgaatgtcataacgaattatggcggaaaattatcgctacttaca
gtgggcaggctttacataaattatttattatcactgaaacgttacgatgaagcggcgaag
ctttgtttgcatgttttgggcaataaaaaggcattatgggaagaagaaatctataaattc
gttaagtgtcaacaactgcgttcggtaagtgcttatttacccacactgaaggagtgtaaa
ttggaagcgtatgtctatgaaatggttttatttgaatttttaaaattcgacccaaaaggg
tttctcaatctgattaaaaattggccctcacatttatacgattgcacagcagtcataaat
gcaatatactccaattttcgtaaagaaaacagcaatgagttactggaagcactagcaata
ttacatatatataaaaaagactacgagaatgcattaaaaatgtatctcaaattaatgaat
aaagatgttttcatacttataagtaaatatgatctctacagtactatacacaaaagaatt
ataccgcttatagagttagacgaagaatgtgcctttaaattattagtcgacaaagaaaag
ataccgcctgaagtagttgttgagcagctggaacaaaatcaggaatatttatttcgttat
cttaaggcgttagacagagttgataaacgcggtacatttcattccaaacttgtacaatta
tatgcgaaatttgaacgagatcaacttctactctttttaaaacgctcaaatcattatgcc
atacaagaagccctcgatatatgtaagcgtaaactgttttatccagaaatggtgtattta
ctaggtcaaatgggtaacacagccgaagccttaaatattattatagacaagatcaaagat
attgaaatggctattgagttctgtaaagaacatgatgattcagatttgtggaatgtttta
atagacgagtccgttaataaccctgaaattgtaacaaaattattagatggaattgtaggt
tatgtcaatcctgaagctgtagttaataaaatcaaagctggacaaaaaattcctggtcta
cgctcagctgttgtaaaaatgctgtgggagtatcgtttacagctaaaagttcttcaaggg
tgtagtaaaatgcaattatgtgactattataaaaatcatgcagaactgatacagcaacaa
aggcgtggtctaagtgtcacatataacaacaaatgtgaaatatgtcagcggttgcttgta
aacaaagatactattccgcacaatgcagtcatcacattcaactgtggacactgttttcat
gaaacctgcgtgtccggtcgctatattagtgagtgctgccatcgatgtaaatattcagac
gaagatgataataatcaatag
DBGET
integrated database retrieval system
