Teleopsis dalmanni (Malaysian stalk-eyed fly): 119687393
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Entry
119687393 CDS
T09311
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119687393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119687393
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119687393
mRNA degradation factors
5'-3' decay
Decapping complex
119687393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
119687393
NCBI-ProteinID:
XP_037957612
LinkDB
All DBs
Position
X:37082779..37096531
Genome browser
AA seq
1349 aa
AA seq
DB search
MILCTLGISYILQTTIYNLNKLKEDRGKYSNKITLKSNFQSAIKATKTTNSQLETVAIPK
TKILNKISFKMSNNFNSEEIVQLETNNDNVPSTSADSCVIDFNGSEFYKKVLYKNVNVVC
GSGKHDHGSSRVKLKNIVDYKWEHKYYPGHLVALHLDGTHIAYVINVNNKSSRVEGMIRV
SNAVTGMRTLIKGLGGAVLDIQFAHIEKEHILGSIDANSLYVHKIDMLDGSLLCNLLVKI
EDPLENYTPKYDRILWCPFIEVTEEDEEETEDSKLIVWARGSKFQCFNIGTIITEYGVGQ
KDPKDFVAGYLNLHDETLTISWTCLSPDGSTLGIGSIDGFVRFYQVYMHEQNPRCLHQWK
PHDGKPISCFYFLDNLATSAPESYWKYAITGADSNTELKVWDCGTWECIQKITFTCEDTS
KTLRLIAELDRTSRYLVLSSLDTRACYVLQIVNLFNNQCKKDENELSDSSNVSSRSSGVA
GAVYVRSITEFPLSSGILSFCIHDAAVRRLKCSNDNYLCEEMDDYDEEMHSLYCVVVRMF
VVQSKSLQECHILYQPQVDDIDIKEDIDVNNEENIANNLNISEDLSSKQNVSPKTENVAT
NLVPSNVVVKPEIDNSEEEMLEALLSLEKTLSSGSSPLPSSVVAVAAAAAVTPSAIASEH
SGTSSPQNGINSKNYVPVNLMTPDEFASTSAEKKTADCVSSEVRNTLLMLASVAASGTPN
NNNENLNILNLVNNKIIEDKEHQKIQLKQAIETQKKFITIDGNMNRNIIDTFASGGSSPS
REVQEILSFRDYKTNAYSTDEMLVSEEKDEVKINLKETEPRSSGTPSKFLWANTPKEVQT
TTSTELQKAVNLIPKTAPTNNLSNNNHPTGHIGHSSNTISNSSSSNTINTANGVDHLEDP
QMLAEILELNKTQARHITALKEEIAEIKNIMANCFVAQKQLVECTQKQISDLTYKIDVQI
PKVVENISIRNENESKKRLAAIMKEQNIEMGDKIMKSLSQLFATQLTPLIAKTINVELQR
NVGPLITGVINNMQSKILIDLTRNLAKMDAGLKETLVQLCKSKSVIEAFSKSILVAVQDS
LQNAFIESMSGSLIPAYEKSSQHMFKQLHEAFSYGIKEFMEQFENYMQETRQTNERAELF
TALSALRQHIENALLKHHHSIGESLAEGRKDVKSMEIIIARQVKEAIRIEMRKISESQNM
QLRSQTNTPAPMYDIRESIKLLLQSGQINKAFHQALLANDLSLVDYTLRNTDPSSVFIPA
CCLEQKVLLSLIQQISADMPNHSETKQRYLAEAILSIDFRDAITREHAPKVLQELLRNIQ
MFIVNYPKSPLVSNVRLLLTTVQACKEKF
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgatattgtgtacattgggcatctcctacatactgcaaactacaatatataatctaaat
aaattaaaagaagatcgtggaaaatattccaataagattacattgaaaagtaattttcaa
tcagcaattaaagcaacaaagacgacaaactcgcaacttgaaacagttgcgataccaaaa
acaaaaattctaaataaaatatctttcaaaatgagtaacaacttcaatagcgaagaaatc
gtacagttggaaaccaacaatgataacgttccaagcacttctgctgatagctgcgtgatt
gattttaatggctctgagttttacaaaaaagttctgtataaaaatgtaaatgttgtatgt
ggttccggcaaacatgaccatggctcatcccgagtaaagttaaaaaatattgttgattat
aaatgggagcataaatactatcccggacatttagttgcattacatttggatggaacacat
atagcatatgttatcaatgttaataataagtcttcacgcgtcgagggcatgatccgtgtg
agtaatgctgtaacgggtatgcgtacactaataaaaggattaggcggtgcagtattagat
atacaattcgcacatattgagaaagagcatattcttggctcaattgatgctaactctttg
tatgttcataaaatcgatatgcttgatggcagtttactctgtaatttgttggttaaaatt
gaagatccgcttgagaattatacaccaaaatacgacagaatattatggtgtccatttatt
gaagttacagaagaagatgaagaagaaactgaagacagtaaattaattgtttgggcacgc
ggttcaaaatttcaatgtttcaacataggcacaataatcactgaatatggtgttggtcaa
aaagatcctaaagatttcgtagctggatatttaaatttacacgatgaaactttaaccata
agttggacatgtttatcaccagatggttcaacattaggaattggcagcatagatggtttt
gtacgtttctatcaagtttatatgcacgaacagaatccacgttgcttacaccagtggaaa
ccacatgatggtaaacctatatcatgtttttattttttggataatttggctacaagtgca
ccagaatcatattggaaatatgctataacgggtgctgatagcaacactgagctcaaagtt
tgggattgcggtacttgggagtgcatacagaaaataacattcacttgtgaagatacaagc
aagacactacgtttaattgcggaacttgatcgtacgtcacgctacttagtgcttagttca
cttgatacgcgtgcatgttatgtattgcaaattgtaaatctcttcaacaatcaatgtaaa
aaagatgaaaatgagctaagtgattccagtaatgtaagttcaagatctagcggtgtcgct
ggtgcagtgtatgtgcgcagcattactgaatttccattaagctctggtatattatcattt
tgtatacatgatgcagcagttagacgtttaaaatgcagcaatgacaattatctttgtgag
gaaatggacgattacgatgaagaaatgcattcattatattgcgttgttgtacgtatgttt
gtggtacaatcaaaaagtttgcaggagtgccatatattgtaccaaccacaagtggatgat
attgatattaaagaggacattgatgttaacaacgaagaaaatattgcaaacaatttaaac
atatcggaagacttgagctcgaaacaaaatgtgagcccgaaaactgaaaatgttgctact
aatttagtgcccagtaatgttgtagtgaaaccggaaatagataattctgaagaggaaatg
ttagaagcgctacttagtttagaaaaaacactttcttctggttcgtcaccacttccatcg
tcggttgttgctgtagctgctgcagcggcagtcacaccttctgctattgctagtgaacat
tcaggcacttcttcaccacaaaatggcattaacagtaaaaattatgtacctgtcaatctt
atgacacctgatgaatttgcttcaacatcagcagagaaaaaaacagcagattgtgttagt
tcagaggttcgcaatactttactgatgttagcgagtgtagctgcttccggcactccaaat
aataacaatgaaaatttgaatatcttaaatttggttaacaataaaatcattgaagacaaa
gaacatcagaaaatccagttgaagcaagcaatagaaactcagaaaaaattcataacaatt
gatggaaatatgaatcgcaatattattgacacttttgcaagtggtggctcaagtccaagt
cgtgaagtgcaagagattttgtcttttcgtgattataaaacaaatgcttacagcactgat
gaaatgctagttagtgaagaaaaagatgaagttaaaattaacttgaaagaaacagaacct
agatcatcgggaactccgtcgaaatttctttgggcaaatacaccaaaagaagtacaaaca
acaacatcaactgaactgcagaaggctgttaatctgataccgaaaactgctccaacaaat
aatttgagtaacaataatcatccgactggtcatattggtcatagcagcaacacaattagt
aacagtagtagcagtaataccatcaatactgctaatggtgttgatcaccttgaagatcca
caaatgcttgcagagattttagaattaaataaaactcaggctcgtcacataacggcactc
aaagaagaaatcgcagaaattaagaatataatggcaaattgtttcgtagcacaaaagcaa
ttagtggagtgtacacagaagcagatttccgacttgacatacaaaatcgatgttcaaata
ccaaaagttgtggaaaatatttcaattcggaatgagaatgaatcgaagaagagattagcc
gcaattatgaaagaacaaaatattgaaatgggcgataaaataatgaaatctttgtctcag
ttattcgcaacacaactaactccattaattgcgaaaactataaatgtagaactgcaaaga
aatgtaggtccacttatcaccggagtaattaacaatatgcagtcgaagatattaattgat
ttgactagaaacttagccaagatggatgcaggtttaaaagaaaccttagtacaattatgt
aaaagtaagagtgtaatcgaagcgtttagtaagtcgattctagttgccgtgcaggatagt
ttgcaaaatgctttcatcgaatctatgtctggcagtttaattccagcttatgagaagtca
tcccaacatatgtttaaacagttgcacgaagccttttcgtatggtatcaaagagtttatg
gaacaatttgaaaattatatgcaagaaaccagacaaacaaatgaaagggcagaactgttt
acggctttatcagctttacgacaacatatcgaaaatgcattacttaagcatcatcatagt
ataggcgaatcactcgcagaggggcgtaaagacgttaagagtatggaaataatcattgct
cgccaagtaaaggaagccatacggatagagatgcgtaaaatatctgaaagtcaaaacatg
cagctacgttcacaaacaaatacacctgcaccaatgtacgatattcgtgaatccattaag
cttcttttgcagagtggtcagatcaataaagcgtttcaccaggcgttgcttgcaaatgac
ttaagtttggtagattatacgctaagaaatactgatccgagttcagttttcattcccgca
tgttgcttggaacagaaggttttactctcattaatacaacaaatcagcgcagatatgcct
aatcatagtgaaactaagcaaagatatttggctgaagctatattatctattgatttccgc
gatgctataacacgtgaacatgcacctaaagtattgcaagagttattaagaaatattcaa
atgtttattgttaactacccgaaaagtccgctagtgagtaatgtacgtctcctactaacg
actgtgcaagcatgtaaggagaaattttaa
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