Teleopsis dalmanni (Malaysian stalk-eyed fly): 119687545
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Entry
119687545 CDS
T09311
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119687545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119687545
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119687545
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119687545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
TORC_N
Motif
Other DBs
NCBI-GeneID:
119687545
NCBI-ProteinID:
XP_037957815
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Position
X:74874891..74891469
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AA seq
828 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKVYKEKYEADLKKEIKKLQR
LRDQIKSWIASGEIKDKSALLDNRRLIETQMERFKIVERETKTKAYSKEGLGAAQKMDPA
QRIKDDARNWLTTSISSLQIQIDQYESEIESLLAGKKKRLDRDKQDRMDELRSKLDRHKF
HVTKLETLLRLLDNDGVEAEQVHKIKDDVEYYIDSSQEPDFEENEFIYDDIIGLDEVELS
GTGVSLGIPSSATTDSNNSNETSGSPSSITSGTSPVQSPPPAQAQHTQQQQPQPGTVQPT
PQAQAQSLQQQPLQSQSNSTNLSYANDTTVADGATCEKRSKNENAAVTKTKQPVKPTAVR
AASNKSTTSTTNDAPGTKIVSSTPSKIHHTQQQPPQQQPTAAAVVAASMNAHVGNNLSTP
GAPTLAATVAGHGTTAQHGQLPNMNVSTAAVVAASATANQTVITNNTIQGQSVIPPSTTI
AFAAVAKNNSSHMENGVTHPATSYAMAAPTVASIVGSTTQQQQQQLSNLQTNSSHLQNGL
PSANNNAVESLSLKTMAQEAINRSTIETNTMAQPPALDVRQSQHQQQQQQVLQQHFASDS
TANQQQQQAASVASVVAASAANGPSTGAGPGVTSIGGLNTSGQSSGLNTSTSGIKQHQPP
KPTSEAHIPPLLGVAPLGPSLLSKEHQMQFQMMEAAYYHLPTPSDSEKLTTYFHRTPVQT
PAHYPQSQLPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMW
FQRHEEPKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDKELN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacacgaaaactacaaggtgaaattgatcgatgccttaaaaaggtagctgaa
ggcgtcgagaccttcgaagatatatggaaaaaggttcataatgcaactaatagtaatcag
aaagtatataaagaaaagtatgaagcggatcttaaaaaagaaattaagaaattgcaacgc
cttcgcgatcaaattaaatcatggatcgcatccggtgaaattaaggataaaagtgcatta
ttagataatcgccggttaattgaaacgcaaatggaacgttttaaaattgttgagcgtgag
acaaaaactaaagcctattcaaaagaaggtcttggtgctgcacaaaaaatggatccagct
caacgcattaaagatgatgctcgtaattggttaacaacatcgataagctcattgcaaata
caaattgatcaatacgagagtgaaattgaatcacttttagctggtaagaaaaagcgtctt
gatcgcgataagcaagatcgaatggatgagttgcgttctaagctggatcgtcataaattt
catgtaaccaaactggaaacattgttaagattacttgataatgatggggttgaagctgaa
caggttcataaaattaaggatgacgttgagtactatattgattcatcacaagagccggac
ttcgaagaaaatgaatttatatatgatgatataattggtcttgatgaagtagaattgtct
ggcacaggtgtttcacttggtattccatcatcagcaactacagacagtaataatagtaac
gaaacaagtggttcacctagcagtataacatcaggaacaagtcccgtacagtcaccacca
cctgcgcaggcgcaacatacacagcaacaacagcctcaacctggaactgtacaacccaca
ccacaggcccaggcacaatcactgcaacaacaaccgcttcaatcacaatcaaattcaacc
aatctgagttatgcaaacgatacaactgtggcggatggtgcaacttgcgaaaagcgtagc
aaaaatgaaaatgcagctgttactaagacaaagcaacctgttaaaccaacagcagttcga
gctgcaagtaataaatccacaacaagtacaactaatgatgctccaggaacaaagatcgtt
agttcaacgcctagtaaaattcaccatacgcaacagcagccaccgcaacaacaaccaact
gcagcagcagtggtggcagcatcaatgaatgcacatgttggaaataacttaagcactcca
ggtgcaccaactttggccgcaacagtagcgggtcacggtacaacagcacaacatggtcaa
ttgccaaatatgaatgtatcgactgcagcagttgtagctgcatcagcaacagccaatcaa
acagtcataacaaacaataccattcaaggtcagtctgtgattccgccaagcacaacgata
gcatttgctgcagtagcaaagaataattcatcacatatggagaatggggttactcatcca
gctacatcgtatgcaatggcagcgccaacggttgcttcaattgttggatcgacaacacaa
caacagcagcaacagttatctaatcttcaaacgaattcctcacatttacaaaatggtttg
ccatcagcgaataataatgccgttgagtctctttcattgaaaactatggctcaagaagca
attaatcgttcaacaatagaaacaaataccatggctcagcctcctgctttagatgtcagg
caaagtcagcatcagcagcaacaacagcaggtgctacaacaacatttcgcctcagattca
actgccaatcaacaacagcaacaggcagctagtgttgccagtgttgtagcagcttctgct
gcaaatggcccttccacgggcgctggtcctggcgttactagcattggtggtttgaataca
agtggtcagtcgagtggattaaatacatcaacatcaggcattaaacaacatcaacctcct
aagccaacaagcgaagcacatattccaccactgctaggtgttgcaccacttggtccatct
ttgttaagtaaggaacatcaaatgcaattccaaatgatggaagcggcctattatcactta
ccaacgccaagtgattcagaaaaattaaccacatacttccatcgaacaccagtgcaaact
ccagctcattatcctcaatctcagctcccaatctacgatactgttgagttttatcagcga
ctctcaacagaaaccctcttctttgttttttattatatggaaggatcaaaggcgcagtat
cttgcagctaaggcactgaaaaaacaaagctggcgttttcatacaaagtacatgatgtgg
ttccagcgtcatgaggaaccaaaaatcattaacgacgactacgaacagggaacctacatc
tactttgattatgagaagtggagccagcgtaagaaggagggtttcaccttcgaatataag
tacttagaggataaggagttgaattaa
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