Teleopsis dalmanni (Malaysian stalk-eyed fly): 119687862
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Entry
119687862 CDS
T09311
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03020
RNA polymerase
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119687862
09124 Replication and repair
03420 Nucleotide excision repair
119687862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119687862
03400 DNA repair and recombination proteins [BR:
tda03400
]
119687862
Enzymes [BR:
tda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119687862
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119687862
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119687862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119687862
NCBI-ProteinID:
XP_037958315
LinkDB
All DBs
Position
X:complement(64366723..64374972)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDDSVCEDLCDDEMNVHLTNEVWQEVCWVVINAYFDEKGLVRQQLDSFDEFIQTSVQQI
VEQSPSIEIQPEAQHENFFTDPMPKFSIKFGQIYISKPTHWEKDGSPGPLMPNEARLRNL
TYSAPIYVDVLETREYPDDIPCLKKHKKAFLGKIPVMLRSSYCLLSHMSDRDLQELNECP
LDPGGYFIINGSEKVIIAQEKMATNTIYVFALKDGKYCFKCEIRSCLEHTLRPTSTLYVN
MLNRNARCVLKESVGRRIIAVLPYIKQEIPIVIVFRALGVIDDRDILERMIYDFEDIEVI
EMIKASLSDAYVIPDQTTALGFIGSRGASAGVTIEKRVSYAKDIVTREMLPHVGISEYCG
TQKSFFLGYMVHRLMMAALGRAETDDRDHYGNKRLDLAGPLLSFLFRGLFRNLIKEVRSF
AQRFLNRGKGFQFDLSIRTNIITDGLRYSLATGNWGDQKKAHQSRAGVSQVLNRLTYAST
LSHLRRVNAPIGRDGKLPRPRQLHNTHWGVLCPAETPEGAAVGLVKNLALMAYISVGSEP
TPILEFLEEWGMENLEEISSSILTYTAKIFVNGCWVGVHRDPDELICTLRKLRRKMDVIV
SEVSIILEPVSREIRIHTEAGRICRPLLVVQENKLLIRKWHINMLKNNFYNDYNWQKLIA
SGAVEYVDTLEEETTMIAMFPSNLLRAENVLSIIPYTHCEIHPAMILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGVYITNYHVRMDTLAHLLYYPMKPLVTTRAMEYLRFSELPAGIN
AITAILSYTGYNQEDSVILNSSAIERGFFRSVFYRSYKDTENRVLHKHEERFEKPFRRSC
ESMRPGFYDKLEIDGIVRTDVRVSGDDAIIGKTMTIITTEKEFGDTIPRFTKRDASTFLR
KTETGYVDQVLLTLNNEGYKFCKIRIRSVRSPQIGDKFASRHGQKGTCGIQYRHEDMPFT
KDGITPDIIINPHAIPSRMTIGHLIECLQGKLGSLKGEFGDATPFNDAVNVEKISNLLME
YKYNGRGNEVMFNGFTGRKIMAHVFLGPTYYQRLKHMVEDKIHARSRGPVQILVRQPMDG
RARGGGLRFGEMERDCQISHGTAQFLHERLYTASDPYKVFVCKYCGLMVIANQRNSSFDC
RVCRNRSQVSQIRLPYAAKLLFQELMAMNIGPRLVT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgattctgtttgcgaggatctgtgtgatgatgaaatgaacgtacacctgacg
aatgaagtgtggcaagaagtatgttgggttgtcattaatgcctactttgatgagaaaggc
ctggtacgtcaacagttggatagtttcgatgaatttattcaaacatctgtgcaacaaatt
gtagaacaatcaccttcaattgaaattcaaccggaagcacaacatgaaaatttttttaca
gacccaatgccaaagttctcaatcaaattcggccaaatatatatatctaagccaactcat
tgggaaaaagatggttcacctggaccgcttatgcctaatgaagctcgcttgcggaactta
acttactcagcgccaatatatgttgatgtgttagaaacaagagaataccccgacgatatt
ccttgcctcaaaaaacataaaaaagcatttttaggaaaaattccagttatgttgcgttca
tcgtactgtttgttgtcacacatgtcagatcgagatttacaagaattaaatgaatgtcca
ctagatccaggtggatatttcataattaacggttccgagaaagtaataattgcacaagaa
aaaatggctacaaacacaatatatgtgttcgctcttaaagacggcaaatactgctttaaa
tgtgaaattcgttcctgtttagaacacaccctcagacctacatcaactttatatgtcaat
atgttgaaccgcaatgcaagatgtgttttaaaagaaagtgtaggccgacgaattatagcc
gtgcttccatacataaaacaggaaattcctatagtgatagtttttcgagcgttgggtgtt
atagacgatcgtgatatacttgagcgtatgatttatgatttcgaagacatagaagtgata
gaaatgataaaagcatccttaagtgatgcttatgtaataccagatcaaacaactgctctt
ggattcattgggtcccgcggcgcttcagcaggtgtaactatagaaaaacgcgtgtcttat
gcaaaagacatcgtgacaagggaaatgttgccacatgttggcatttccgaatactgtgga
acgcagaaatcattttttttaggttatatggtccaccgtttaatgatggctgcactaggg
agagctgaaacagatgatcgtgatcattatgggaacaaacgcttagaccttgcaggtccg
ttattgtctttcctatttcgaggattgtttagaaatttaattaaggaagttcgatcattt
gcacaaagatttctaaaccgtggaaaaggttttcagttcgatttatccatcaggacaaat
ataattacagatggactacgttattcgctggctactggcaattggggtgaccaaaagaaa
gcacatcagtcacgcgctggagtatcccaggtattgaatcgactaacgtatgcatcaacc
ttatcgcatttacgtagagtaaatgcaccaattggtcgcgatggcaaattaccaagacct
cgtcagctgcataacacacattggggtgtactatgtccagcagaaactccagaaggtgca
gcggttggtttagttaaaaatttagcactaatggcatatatatctgttggttcagaacca
acgccaatacttgagtttttggaggagtggggtatggaaaatttggaagaaatctcgtca
tcaattttaacttacactgctaagatatttgttaacggttgctgggttggagtacatagg
gatccagatgagcttatatgtacattacgtaaattgcggcggaaaatggatgttattgtg
agcgaggtatcaattattctcgaaccagtctcccgtgaaattcgaatacatactgaagca
ggtcgtatatgccggccacttctagttgtacaagaaaacaaactgcttattagaaagtgg
cacataaatatgttgaagaataatttttataatgattacaattggcaaaaattgatagca
tcgggtgctgtagaatatgtcgatacattggaagaagaaactacaatgatagccatgttt
ccaagtaatcttttacgcgctgaaaatgttttatctattattccatatacacattgtgaa
atccatccagctatgattttaggtgtctgtgcatcaataattccttttcctgatcacaat
caaagtcctcgtaatacttatcaaagtgctatgggtaaacaagctatgggagtttatata
accaattatcacgtccgcatggacacattagcccatttactttattatccaatgaaaccg
ctagtaacaacacgtgcaatggaatatttaagatttagtgaacttcctgctggtattaat
gcaattacagctattttaagctacaccggctataatcaagaagattctgttatattaaac
tcgtcagctatagagcgtggtttcttccgttctgtcttttaccgttcctacaaggacaca
gaaaatagggtattacacaaacatgaagaacgttttgaaaaaccatttagaaggtcatgt
gaatcaatgcgacctggtttctacgataaattagaaattgatggcattgttagaactgat
gttcgagtgtcaggtgatgatgcaattataggcaaaactatgacaataataacgactgag
aaagagtttggtgacacaatacctcgttttactaaacgtgatgcgtcaacatttcttcga
aagacagaaactgggtatgttgatcaagtactactgaccttaaacaatgagggatataag
ttttgtaaaattcgtatacgttctgttcgctctccccaaattggcgacaagtttgcttct
cgtcatggccaaaaaggaacttgcggtattcaatatcggcacgaagatatgccttttaca
aaggacgggattacccccgatattatcataaatcctcatgctattccatctcgtatgaca
attggacatttaatcgaatgtttacaaggaaaactcgggtcattgaagggggaatttgga
gatgctacgccttttaatgatgcggttaatgtggaaaaaatttcaaatttgttaatggag
tataagtataatggacgtggaaacgaagtaatgtttaatggtttcactggtcgaaaaata
atggcgcatgtgttcttaggtccaacgtactatcagcgacttaaacatatggtggaagac
aaaattcatgcacgttctcgcggacccgtgcaaattttagttcggcaaccaatggatggt
agagcacgcggtggtggtttacgttttggtgaaatggaacgtgattgccaaatttcacac
ggcacagcgcagtttctgcatgagcgactgtataccgcttctgatccgtataaagtattc
gtatgtaaatattgtggtttaatggtaattgcaaatcaacgcaatagtagttttgattgt
cgggtatgtagaaataggtctcaagtctctcaaatacgtttaccttatgcggccaaacta
ctatttcaagaacttatggcaatgaacattggaccacgtttagtaacataa
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