Teleopsis dalmanni (Malaysian stalk-eyed fly): 119689717
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Entry
119689717 CDS
T09311
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03018
RNA degradation
tda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119689717
09123 Folding, sorting and degradation
03018 RNA degradation
119689717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tda03019
]
119689717
03041 Spliceosome [BR:
tda03041
]
119689717
Messenger RNA biogenesis [BR:
tda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119689717
mRNA degradation factors
5'-3' decay
Lsm complex
119689717
Spliceosome [BR:
tda03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119689717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF6897
Motif
Other DBs
NCBI-GeneID:
119689717
NCBI-ProteinID:
XP_037960534
LinkDB
All DBs
Position
X:41551516..41552064
Genome browser
AA seq
112 aa
AA seq
DB search
MAEKQKTGANSEGKEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDN
TVEYVRDLDEPLKLAEDTRSLGLVVCRGTALVLICPQDGMESIPNPFISQDA
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaacagaagactggtgcgaatagtgaaggcaaagaaaaacgccgaaaggaa
tccattttagatctatcaaaatatttggaaaaacaaatacgtgtgaaatttgcaggaggc
cgtgaagcttctggtatcttaaaaggctacgatgcactgctaaatttagttttggacaat
actgttgaatacgttcgagatttggacgagccattgaaattagcggaagacacaagaagc
ttgggtttagttgtctgccgcggtacagcgttagtacttatttgcccacaagatggcatg
gaatcaataccaaatccttttatatcacaagatgcgtaa
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