Triticum dicoccoides (wild emmer wheat): 119266667
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Entry
119266667 CDS
T07278
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119266667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119266667
03012 Translation factors [BR:
tdc03012
]
119266667
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119266667
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119266667
Translation factors [BR:
tdc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119266667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
NACHT
AAA_16
PhoH
ATPase
Motif
Other DBs
NCBI-GeneID:
119266667
NCBI-ProteinID:
XP_037403810
LinkDB
All DBs
Position
3A:12497153..12506821
Genome browser
AA seq
1244 aa
AA seq
DB search
MLLASSVLRGRLRPLRRPRPLIMPSPLFLSRNPSPSTSSSASPQLPSPSAMSTSGVYVPP
MRRLRSVIASTNGNLAPPPAVQPAWTPEWRADGRSLSPPSPPQPQRRTAALPPRPPPPQT
QPLRQQTAGYSRYAYDDFSEEESDREMDRTSVSSKGGASTLENVDEWKWKLHMLLRNDNE
QEIMSREKKDRRDFDQLAQLADRMGLHSRQYSRIIVFSKVPLPNYRSDLDDKRPQREVSI
PSGLQREVDALLADYLARKRTDSGNFPNAAFSRSSSTDSFATDESFYEQQDNQTSTNVVM
ERIQRRKSLQLRNQQAAWQESNDGQSMMEFRRSLPAQKERQSLLEAISQNQVVVVSGETG
CGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEKIGESVGYKVR
LEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPR
RPELRLVLMSATLNAEMFSSYFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRLTPYNQID
DYGQEKSWKMQKQALRKRKSQIASVVEDAVKAADLRDYSPQTRDSLSCWNPDSIGFNLIE
NVLCHICQKERDGAVLVFMTGWDDINTLKDQLQSNPLLGDPSKVLLLACHGSMASSEQKL
IFDKPEPGVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKAS
ARQRRGRAGRVQSGECFHLYPQCVYNVFADYQLPELLRTPLQSLCLQIKSLRLGSISEFL
SRALQSPESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCL
DPILTIVAGLSVRDPFMTPFDKKDLAESAKLQFSCRDYSDHLAIVRAYDGWRDAERDRNG
YDYCWRNFLSAQTLKALDSLRRQFLFLLKDTGLIDENMTMCNKWSRDENLVRAIICAGLY
PGVSSVVNKEKSVSLKTMEDGQVMLYSSSVNGKEAKIPFPWLVFNEKVKVNSVFLRDSTA
ISDSILLLFGGNIQQGGLDGHLKMLGGYLEFFMSRDLASTYLNLKGELENLIHCKLQNPR
IDIQTSEELLSAVRLLVTEDPCSGRFVYGRQEPRSKKAKTMISSASVASMDRGGGGGHGG
DNPKNQLQTLLTRAGHDNPSYKTKQIKNTLFRSTVEFNGMQFVGQPCANKKLAEKDAAGE
AISWLTGGEAPLVTANARDRQDADHMSMLTKPAPRRRRHHHRRS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgctcctggcctcctcggtgctgcggggtcgcctccgccccctccgccggccccggccc
ctgatcatgccctcccctctcttcctctcccgaaaccctagccccagcaccagcagcagc
gcgagcccccaactcccctcgccttccgccatgagcaccagcggcgtctacgtgccgccg
atgcgccggctccgctccgtcatcgcgtccaccaacgggaacctcgcgccgccgcccgct
gtgcagcccgcgtggacgcccgagtggcgggccgacgggcgctccctcagcccgccgtcg
ccgcctcagccgcagcgccgcacggctgccctcccaccccggccgccgccgccccagacg
cagcccttgcgccagcagaccgctgggtattctcggtacgcctatgacgacttctccgag
gaggagtcggaccgggaaatggaccgcacgtcagtttctagcaaggggggtgcatctact
ttagagaatgttgacgaatggaaatggaaactgcacatgcttctccgtaacgacaatgaa
caagagattatgtcgagggagaaaaaggacaggcgtgattttgatcaacttgcccaactg
gcagatcgaatgggtttgcacagccgtcagtattcccgaatcatcgtgtttagtaaggtc
cccttgcctaattatagatcagaccttgatgacaaaagacctcaaagagaggtatctata
ccttctggcttgcaaagagaagttgatgcattgcttgcagactatcttgcgcggaagaga
acagacagtgggaactttcctaatgctgccttctcaaggtcaagcagcacggacagtttt
gcaactgatgaaagcttctatgagcagcaggataatcagacatcaaccaatgttgtgatg
gaaagaatccaaagaaggaaaagcttacagttgcgtaaccagcaagctgcttggcaggaa
tcaaatgatggtcagagcatgatggagtttcgtcgaagtcttcctgcccagaaagaaagg
caatcactattggaagctatatctcagaatcaggtggttgtagtttcaggtgaaactggc
tgtggtaagacaacacagttgccacaatacattttggaatctgaaatagaagccgctcgt
ggtgctacttgcagtatcatttgcactcaaccaagacgaatatcagctatttctgtttct
gaaagagttgctgctgaaagaggtgaaaaaattggggaatcggttggctacaaagttcgg
ttggaaggaatgagaggaagggatacacgccttctgttctgcactactggggtcctgttg
cgaagattgctggtggacagaagcttgaaaggtgtcacccatgttattgtggatgaaatt
catgaacggggcatgaatgaagattttctccttattgtcctaaaggaccttcttcctcgc
cgaccggagctaaggcttgtattgatgagtgcgaccctcaatgctgagatgttctcttca
tactttggtggagcacccatgatacatatacctggttttacataccctgtccggagtcgt
ttcctagaagatattcttgaagttactggccacagattgactccgtacaatcagattgac
gactatggccaagagaaaagttggaagatgcaaaagcaagctctacggaagagaaagagc
caaattgcttctgttgtggaagatgcagttaaagctgcggatctaagggattatagtccg
caaactcgtgactctctatcctgctggaatcctgattcaattggttttaacttgatagaa
aatgtcttgtgccatatttgtcaaaaggaaagagatggtgctgtgcttgtatttatgact
gggtgggatgacattaatacgctaaaagatcagctacaatccaacccattgcttggcgac
cctagtaaagttttgctgcttgcatgtcatggttcaatggctagctcagagcagaaacta
atatttgacaaacctgagcctggtgtaaggaaaatagttcttgccaccaatttggctgaa
actagtattactatcaatgacgtagtttttgttgttgattgtggaaaagcaaaagagaca
tcttatgatgcactgaacaatactccctgtctgcttccgacctggatctccaaggcttct
gctagacaaagacgaggaagagctggccgtgttcaatcaggggaatgtttccatctctat
ccacagtgtgtatataatgtgttcgccgactaccagttgccggaacttttgagaactcct
ctccaatccctttgtttgcaaataaaaagtttgcggcttgggagcatctcagaattttta
tccagagctttgcagtcacctgagtctctatcggtacaaaatgccatcgaatatctcaaa
gtcattggagcattcgatcagaatgaagagttaacagttctaggaaaacacctgtctatg
cttccagttgagcctaaattaggcaagatgcttatttttggggctatatttaattgcctt
gatcccatattaaccattgttgctggacttagcgtaagagatccattcatgacaccattt
gacaagaaggatcttgcagagtctgctaagttgcagttctcatgccgtgactatagtgac
caccttgcgattgttcgtgcttatgatggatggagagatgctgaaagagatcgcaatggc
tatgactactgctggaggaattttctgtcagcgcaaaccttgaaagccctagattctctc
cggaggcagttcctctttcttttaaaggacactggcttgattgatgaaaacatgactatg
tgcaataaatggagtcgcgatgaaaatcttgttcgggcaatcatttgtgcgggtttatac
ccaggtgtttcgtctgttgtgaacaaggagaaatcagtttctctcaagacaatggaggat
gggcaggttatgctttactcgagctcagtgaatgggaaagaagccaagattccattcccc
tggctagtgttcaatgagaaagtgaaggtgaattcagtgtttctccgggattcaacagcg
atatctgattctatattgctgctctttggaggaaacatacaacaaggaggcttggacgga
cacttgaaaatgctcgggggatatctggagttcttcatgagtcgcgatcttgcatcgact
tacttgaatctcaagggtgaacttgaaaatttaatccactgcaagcttcaaaacccaagg
attgacatccaaaccagcgaggagctgctgtcagccgtacggctgctggtcacggaggac
ccatgcagcggtcggttcgtctacggccgtcaagaaccaagatcaaagaaagcaaagacg
atgatctcttccgcctcggtggcctccatggaccgcggaggcggaggcgggcacggaggg
gacaaccccaagaaccagctgcagaccctcctgacaagggcggggcacgacaacccgtcc
tacaagacgaagcagatcaagaacaccctcttcaggtcgaccgtggagttcaacggcatg
cagtttgtggggcagccgtgcgccaacaagaagctggcggagaaggacgcggcgggggag
gcgatcagctggctgacgggcggggaggctcctctggtgacggccaacgcgagagaccgg
caggacgccgaccacatgtccatgctgacgaagccggctccacgcaggaggcggcaccac
cataggaggagctga
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integrated database retrieval system
