KEGG   Triticum dicoccoides (wild emmer wheat): 119266939
Entry
119266939         CDS       T07278                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030  DNA replication
tdc03410  Base excision repair
tdc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119266939
   03410 Base excision repair
    119266939
   03420 Nucleotide excision repair
    119266939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdc03032]
    119266939
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119266939
Enzymes [BR:tdc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     119266939
DNA replication proteins [BR:tdc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    119266939
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      119266939
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 119266939
NCBI-ProteinID: XP_037404123
LinkDB
Position
1A:214309425..214345838
AA seq 2241 aa
MSGGDGRRRRPSAGGGGGGGVGGSWGGRRSGSSAAKEQRIRLGAEELLEGRLGFAPYTQG
DRRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYAATKEKTELE
VEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHVVE
KNEEERDAVDAFESIYGVKRVERPQDYINCIIDLREYDVPYHVRFAIDNDVRSGQWYNVG
VFGSDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMIDGQGYLIIN
RECVGEDIEDLEYTPKPEFEGHFRVKNVADEVGLLKAWFSHMQEVKPGIYVTYNGDFFDW
PFLEKRAAHHGIKMNEEIGFQCDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVT
KAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMS
PDEVLRKGSGTLCEMLLMVQAFQANIICPNKHQADLEKFYNNRLVESETYIGGHVECLET
GVFRSDLPTKFQLEPSAFEQLIENLDRDLQYAIAVEGKLDIDSVTNYDEVKDAIKQKLVS
LRDHPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTLEW
VWRGETYTAKKSDYHHIKRQIESEMIQTGGVTSSKPFLDLSKPEHLLKLKDRLKKYCQKG
YKRVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLSEAKASGNSI
KIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLL
VDKIGRPLELDTDGIWCVLPGSFPENFTFKTKAEKKLTISYPCVMLNVDVARTNTNDQYQ
TLKDPVSKLYTTNSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGF
EIKRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVASVANRWLDLLDNQGIDISDSELLG
FISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVSE
RAVPVAIFETDAGNTFHANRCFCIPNLFNLLTLSSYLTEVAKFYLRKWCKVSAEANIRFI
LDWSYYKQRLSSAIQKIITIPAAMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMF
SPLNKDMGMHNLNGTGDIEDLLTSDKGLRKATASHGFNIGKENHPNGSPSAKASLGHCKN
QQKSVIRSNEPLRDDSADEIVDRSTDYQGWLEARKRKWKYVREQKKRRRLGAAASSEGPS
NNLFSARNDSQLHGNGRNRSTFFQKQELSLFRSHWQIIQLAPSTLPGRFFAWVVAEGIMF
KIPINVPRVFYLNSKAPITDEFPGRRVKKILPHGKPSFNLIEVVTSEEQFRAEGRKLAAH
LAEPDVEGIYETKIPLELNAILQIGCVCKVDKSAEKRNIQDGWDLAELQMKTTAEFSYLE
QTVSFFYLYHSVSEGRAVYVMYFPTSLRVHAVVINPFRNKELSPAFLEKQFRDACQTPDP
LHENLTFQVDYHTSMDAGSKYVQRMLLEYRQQHPGPVIGIIECPKLQAIRESVRALDDFP
CVTIPCNARDNNYQALGWQATAGRTSMQRCAASTQWFNERISLARYAHVPLGNLELDWLL
FTADVFFSRALHDQQQVLWISDDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRISVEL
KIHHLAVNSLLKSSQVDEMEGGSIGNFENDIPPGPNATETDYNDASLCLPAFQVLKQLIQ
RCISDAVSSGNVFADAILQHLYRWLCSPRSRLHDPALHRLLHNVMKKVFALLLAEFRKLG
ANVIFANFSKIIIDTGKVDLPSARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQY
NYGGIQAKTQNVTSADSSDGDDDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMK
EQVACRAAMRDDTSCTPSITIMAAENLEGQVVDYLRGQIGTYFAEKLLTIVSDILLHFKG
KGKSESVGPSNSELDPHLHKGGAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKE
FAPEAQFQDPYASFILPNVICSYCNDCRDLDLCRDSTLQGHEWRCAVPQCGQPYHREEME
NALLQIVRQRERLYHLQDLVCVRCRQVKAAHVSEQCNCGGSFRCKEEAPQFLGKMRVFLN
VAVSQKFELLQDCVRWILEVR
NT seq 6726 nt   +upstreamnt  +downstreamnt
atgagcggtggtgatggtcggcgacggagaccgtcggccggaggaggtggcggcggcggc
gtcggcggcagctggggcggtcggaggtctggatcttcggcggcaaaggaacagcggata
cggctgggcgcggaggagctcctcgagggccggcttggcttcgcgccctacacccaaggc
gaccgccggcttggctggctcctcaccttctccccctcatcatgggaggatgaggataca
gggaaaatctacagctgtgttgacctgtactttgtgtcccaggatggttctacatttaaa
gtgaagtacaaattcccgccttatttttatgctgcaactaaggagaagacggagttggaa
gttgaggcgtatctcaggcgacgttatgaaggggaaatcgctgatatagaaataattgaa
aaagaggatctggatcttaaaaaccacctttctggtttgaagagaaaatatttgaagatt
cagttcgataccgtgcagcaattaatgcgtgtaaggagtgatctaatgcatgttgttgaa
aagaatgaagaagaaagagatgccgtggatgcatttgaatcaatttatggtgtaaaaagg
gtagaaaggccacaagattacataaactgcatcatcgatttgcgtgaatacgatgttccc
tatcatgttcgtttcgctatagataatgatgtgagatctggacagtggtataatgttggt
gtatttggttctgatgttttgcttcagagaagggaagatctgcttcagcgtgcagaagtt
catgtatgtgcatttgatattgagaccacaaagcttcccttgaagtttccagatgctgaa
tacgacagtgtaatgatgatctcctacatgatagatgggcaagggtacttgataatcaac
cgagagtgtgtaggggaagacattgaagatttggaatacacacctaaaccagaattcgag
gggcattttagagttaagaatgtcgcagacgaggtgggtctacttaaagcttggttttct
cacatgcaagaggttaaacctggtatttatgttacgtacaacggtgacttttttgactgg
ccgtttttggagaagagagctgcccaccatgggataaaaatgaatgaggagattggtttc
caatgcgacagtaatcaaggtgaatgccgagctaaattttcctgtcatcttgactgtttt
gcctgggtgaagcgagacagttaccttccacagggaagccaaggtctaaaggctgttaca
aaagccaagcttggttatgatcctctggaggtcaatccagaagatatggttcgctttgca
atggagcagccacagacaatggcttcttattctgtatcagatgctgttgccacatactac
ttatacatgacttatgtccatccatttatcttctcccttgcgaccataatacctatgtca
cctgatgaggtgttgcggaaaggaagtgggactctatgtgaaatgctgctaatggtccag
gcattccaggctaatatcatttgtcctaacaagcaccaagctgatctggagaagttttac
aataaccgtctagtagaaagcgaaacatacatcggtggtcatgttgagtgtcttgaaact
ggtgtatttagatctgatcttcctacaaaatttcagctggaaccctcagcatttgagcaa
ctaattgaaaaccttgaccgtgatctgcaatatgccattgctgtagaaggaaaattggat
attgattctgtcacaaattatgatgaagtcaaggatgccataaagcaaaagcttgtttca
ttgcgagaccacccaactcgtgaagaatgccctcttatatatcatctggatgttgctgca
atgtatccaaatatcattttgacaaataggctccagccaccatccatagttacagatgtg
gactgcacagcatgtgatttcaatcgccctggaaagaattgccttagaacgctcgaatgg
gtctggcgaggagaaacctacacggcaaaaaagagtgactatcatcatataaagaggcaa
attgagtcagagatgattcaaactggtggggttacatcttcaaagcctttcctcgacctc
tcaaaaccagagcatttactaaagctgaaggatcgtttgaagaagtactgccagaagggg
tacaaaagagtagttgacaaaccaattacagaagttagagaagctggaatatgcatgcgt
gaaaattctttctacgtagatacagtgcgaagctttcgtgatagaaggtatgaatacaaa
ggcctgaataaaacatggaaaggaaaactatcagaagcaaaagccagtggaaattctatc
aaaattcaggaagcacaggacatggttgtgctatatgattctttgcaacttgctcacaag
tgcatattaaattctttttatggatatgttatgcgcaagggtgcaagatggtactctatg
gaaatggctggtgttgtaacatatactggtgcaaaaatcatccaaaatgctcgattgctt
gtagacaaaattggaagaccactggaactcgacacagatggcatttggtgtgttttgcct
ggttctttcccagagaattttactttcaagacaaaagctgagaagaagctcacaatatct
tatccatgtgtgatgcttaatgttgatgttgcaagaaccaacaccaatgatcaatatcaa
acattgaaagatcctgtaagcaagctatacacaacaaatagtgaatgctccatcgagttt
gaggtagatggaccatacaaggccatgattctacctgcctctaaagaggaagggattctg
ataaagaagaggtatgctgtcttcaacgaagatggcaccctggcagaacttaaaggcttc
gagattaagcgtcgaggtgagctgaagctcatcaaagtttttcaggcggaggtattcgat
aaatttctccatggctctactttagaggagtgctatgcagctgttgcctctgttgctaac
cgctggttagatctactggacaatcaaggaattgatatttctgacagtgagttgcttggg
ttcatatcggagtcaagcacaatgagtaagtcccttgttgactatggagaacagaagtca
tgtgctgtaactacagcaaaaagacttgcagaattccttggagattcaatggttaaagac
aaaggactgcactgccaatatatagttgcccgagagccacaaggcaccccagtgagcgag
cgtgctgttccggtggctatttttgagacagatgctggtaatacttttcatgcaaatcgc
tgcttttgtatccccaacctgttcaacttacttacactatcctcttatttgacagaggtc
gcaaagttctatttaagaaaatggtgcaaagtctccgcggaagcaaacatccgatttatt
cttgattggtcttactacaagcagcgcctaagctcggctattcagaagatcataactatt
cctgcagcgatgcaaaagatttcaaatcctgttccccgagttcttcatcctgattggttg
cataaaaaggtcagagagaaggatgaccgatttcgtcaacgcaaactacgtgatatgttc
agtcccttgaataaagacatggggatgcataacttgaatggaactggagacatagaagat
ttgttaacatcagacaaaggtttgagaaaagctactgcatcccatggttttaacatcggc
aaagaaaatcatccaaatgggtcaccatcagcaaaagctagtttgggtcattgcaaaaac
cagcaaaaatctgtaatcaggtcaaatgaaccactccgagatgactctgctgatgaaata
gttgatagaagtactgattatcaaggatggcttgaggccaggaagagaaaatggaaatat
gtccgtgaacagaagaaacgtcgaaggttgggtgctgcagcctcttctgagggtcccagt
aataatttgttttctgcaagaaatgacagtcagttacatggcaatggtaggaatcggtct
acatttttccagaaacaagaattgtccctctttagatcacattggcagataatccagctt
gctccaagtacattgcctggccgtttttttgcatgggttgttgctgaggggatcatgttc
aagattcccatcaatgtgcctagagttttctacctaaactcaaaagctcctatcacagat
gagtttccaggaaggcgtgtaaagaagattcttcctcatggaaaaccatctttcaatctc
atcgaggttgtaactagtgaagaacagttcagggctgaaggaagaaaacttgctgctcat
cttgcagagccagatgttgaaggcatatatgagacgaaaattccactggagctaaatgct
attctccaaattggttgtgtctgcaaagtggacaaatctgcggagaaacgaaatatccaa
gatggatgggatcttgctgagttgcaaatgaaaacaactgcagagttctcatacctggaa
caaacagtttcatttttctatctataccacagtgtgtctgaaggaagggctgtatatgtc
atgtacttccctacatctctcagagtacatgcagtggttatcaatcctttccgtaataaa
gaactgtcacctgcgtttcttgaaaagcaatttcgggatgcttgccagactcctgaccct
ttgcatgaaaatctcactttccaggtggactaccacacatcaatggatgcaggtagcaaa
tatgtgcaacgaatgttacttgagtacagacaacaacatcctggacctgtcataggcatc
attgaatgccctaaactccaagctataagggaatctgtacgtgcacttgatgatttcccg
tgtgtaaccattccttgcaatgcacgggataacaactatcaggctcttggttggcaagcg
acagctggtagaacaagcatgcagcgctgtgctgcatcaactcaatggttcaatgaaaga
atttcacttgctagatatgcacatgtgccattgggaaaccttgaacttgattggcttctt
tttactgctgatgtgttcttctcaagggcattgcatgatcaacaacaggtactatggata
tctgatgatggtattcctgatttaggcggcacatatgaaggagatacatgctttgctgat
gaagtcatacaacctgcactaacatatcctggcgcttataggaggatttctgttgagctt
aagattcatcatttggcggttaattctctccttaagagtagtcaagtggatgaaatggaa
ggaggatctatcggcaactttgaaaatgacattcctcctggtccaaatgccaccgaaact
gactataatgacgccagcttgtgtctacctgctttccaagtgctgaagcaactcattcaa
agatgcatctcggatgcagtgtcttctggaaatgtatttgctgatgcgatattgcaacat
ctctaccgttggctttgcagcccacgatcaagacttcatgacccagctctccatcgcctc
cttcataatgtcatgaagaaggtctttgctctattgttagctgagtttcgaaagcttgga
gctaatgttatctttgcaaacttttctaagataatcatagataccggaaaagtggacttg
ccgtcagcacgtgcatactgtgatagcttgctgaaaaccttacagacaagggatcttttc
gagtggatagaactggaacctttgcactattggcactccttactgttcatggatcagtac
aactacggtgggattcaggccaaaacacaaaatgtaacatctgcagacagttcagacggt
gatgatgatattgacatcgtgtcaagctggaatatagcagaatacttgcccaaagctaca
caggatcactttgtcttgatcgtatcggagttcctatatgttccatggaaatacatgaaa
gaacaagtagcttgccgagcagctatgagggatgacacctcatgcactccatctataaca
atcatggctgctgagaatcttgagggacaggtcgttgattacctccgtgggcagatcggc
acttattttgcggaaaagcttctcacaattgtgagcgatatacttctccatttcaaagga
aaaggcaagtctgaatcagttggaccttcaaatagtgaacttgatcctcacttacataaa
ggcggtgctgcattggagttcattaaacatatatgtgctgttcttgctctcgatcagaat
gttcagcatgatattctgagaatgcgaaagaacttgttgaagttggtgcgcgtaaaggaa
tttgctccagaagcacagttccaagatccctatgcctcattcatccttccaaacgtgatt
tgcagctattgcaacgattgccgggaccttgacctctgccgcgactcgacgctgcaaggc
cacgagtggaggtgcgcggtgccgcagtgcgggcagccgtaccaccgggaggagatggag
aacgcgctgctgcagattgtgcggcagcgagagaggctgtaccacctgcaggacctggtg
tgcgtccggtgcaggcaggtgaaggcggcccatgtgtcagagcagtgcaactgtggaggg
tcgttccggtgcaaggaggaggcgccgcagttccttggcaagatgcgggtcttcctgaac
gtcgcggtgagccagaagttcgagctgctccaggattgcgtccgatggatcctggaggtc
aggtga

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