Triticum dicoccoides (wild emmer wheat): 119266941
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Entry
119266941 CDS
T07278
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119266941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119266941
03036 Chromosome and associated proteins [BR:
tdc03036
]
119266941
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
119266941
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
119266941
RSF complex
119266941
WICH complex
119266941
B-WICH complex
119266941
NORC complex
119266941
BRF complex
119266941
NuRF complex (fruit fly)
119266941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
Myb_DNA-bind_6
AAA_14
Motif
Other DBs
NCBI-GeneID:
119266941
NCBI-ProteinID:
XP_037404125
LinkDB
All DBs
Position
3A:42211049..42219205
Genome browser
AA seq
1132 aa
AA seq
DB search
MARPARRRAVEEEEEESSSSGEEQQDQSDAGGSGSGEEAGGGDAEEEVDEEEIEAVTTGA
GADEEEEDGGEEDGEEEPESDDADEAEDPAGIPEVGKQERARLKQLQKLKKQKIREILQT
QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAEGSQTKEKKPRGRGRPASKRRAVEEDDEE
YLQEEEDALASSVGTHLLVQPSCINGQMRDYQLAGLNWLIRLYENGINGILADEMGLGKT
LQTISLMGYLHEFRGITGPHMVVAPKSTLGNWMNEIARFCPILRAVKFLGNPEERNHIRE
KLLQPGKFDVCVTSFEMAIKEKNSLKRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYR
LLITGTPLQNNLHELWSLLNFLLPEIFSSADTFDEWFQITGENDQQEVVQQLHKVLRPFL
LRRLKSDVEKGLPPKKEIILKVGMSQMQKHYYRGLLQKDLEVINAGGERKRLLNIAMQLR
KCCNHPYLFQGAEPGPPYTTGDHLIETAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDI
LEDYLIYRGYQFCRIDGSTGGQDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVV
ILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ
GRLSGQKTVNKDDLLQMVRYGAEMVFSSKDSTITDEDVDRIIAKGEETKAALDAKMKKFT
EDAIKFKMDDTAELYDFDGDKEENEADFKKIVAENLVVELPRRERIRNYNESEYFKQALR
QAAPAKPKELRIPKMPTLHDFQFFNSQRLNELYEKEVRHLVQTNQKKDTIDGEDEDQVEP
FTAEELEEKQRLLEAGFATWTKRDFNTFIRACEKYGRNDIKGISSEMEGKTEEEVQRYAE
VFKERYTELSDYERIIKNIERGEARITRKDEIMTAIGKKLDRYKNPWLELKVQYGTNKGK
FYNEECDRFMLCMAHKLGYGKWDELRSAFRKSPLFRFDWFVKARSAQELARRCDTLVRLV
EKENQEYDERERQARKEKRLAKKMTPTKQKMTPTKQKTTPTKQKTTPTKQAASRVSDGET
APANPSKKNKTPTKQKMTPTKRAGETAPAASSKKRRQSLMDDFLGSGKKGKA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccggcgaggcgccgcgccgtggaggaggaggaggaggagtcctcctcctcc
ggcgaggagcagcaggaccagtccgacgccggcggctccggatccggcgaggaggcggga
gggggcgacgcggaggaggaggtcgacgaggaggagatcgaggccgtcaccaccggcgcg
ggcgccgacgaggaggaggaggacggcggggaggaggatggggaggaggagccggagtcc
gacgacgccgacgaggccgaagaccctgctggaattccagaggtagggaagcaagaacga
gccaggctcaaacaacttcagaaactgaagaagcagaagatccgagagatattacagacc
cagaatgctgcaattgatgctgacatgaacaagaaagggaaagggcgattgaagtaccta
ctgcagcagacagaaatatttgcccactttgcagaaggaagccagactaaagagaagaag
ccacgtggaaggggacgccctgcgtcaaagaggagggcagtagaggaggacgatgaagag
tacctccaagaggaggaagatgcacttgctagttcagtcggaacacacttgcttgtgcag
ccatcatgcataaatggacaaatgcgagattaccaactagctgggcttaattggctcata
cggctgtatgaaaacggcattaatggaatattggctgatgagatgggtcttgggaaaact
cttcaaactatttcactgatgggctatctgcatgaattcagaggaataactggtcctcac
atggttgttgcgccaaagtctactcttggtaactggatgaacgaaattgctcgtttttgt
cccattttgcgtgctgtgaaattcttgggaaatccagaagagaggaatcatataagggag
aaattgctacagccaggaaaattcgatgtgtgtgtgaccagttttgaaatggcaatcaaa
gaaaaaaattcattgaagcgtttcagctggcgctacattattattgatgaagctcatcgg
ataaaaaatgagaactctcttctgtctaagacgatgaggctttttagcactaactatcgt
ctactcatcacaggcactccactccagaacaatctccatgagctttggtctctactcaat
ttcttgctgcctgagatatttagttctgcagacacctttgatgagtggttccaaattact
ggtgaaaatgatcaacaggaggttgttcagcagcttcataaggttcttcgcccatttctt
ctccggaggcttaaatctgatgttgaaaagggtttacctccaaagaaagaaattatcctt
aaagttgggatgtctcagatgcaaaagcattactatcgaggtctgcttcagaaagatttg
gaggttattaatgctggtggtgaacgtaaaagattgcttaacatagccatgcagttacgg
aagtgctgcaaccatccatatttattccaaggggcagaaccgggcccaccttacacaact
ggtgaccatcttattgagactgcagggaaaatggtgctcttagataaattgctgcccaaa
ttaaaggaccgtgactccagagtgcttattttctcacagatgaccaggcttttggatatc
ttggaagattatcttatatacagagggtatcagttttgccgaatagatggaagtacaggt
ggacaagatcgtgatgcatccattgatgcatttaacaaaccaggaagtgagaagtttgtt
ttcttgctttcaaccagggctggtggacttggtatcaaccttgccactgctgatgttgtg
attctttatgatagtgattggaatccacaagctgatcttcaagctcaagaccgtgcgcat
aggataggtcaaaagaaagaagttcaagttttccgattttgcaccgagtataccattgag
gaaaaagtgattgagagagcatacaagaagctcgcattggatgctttggttattcaacaa
ggacgattgtcagggcagaaaactgtcaataaggatgacttattgcaaatggttagatat
ggtgcggaaatggtgttcagttccaaggatagcacaataacagatgaggatgttgacaga
attatagctaaaggagaagagacaaaagcagcgctggatgcaaagatgaaaaaattcaca
gaggatgccattaagtttaaaatggatgacactgctgaattgtatgattttgatggtgat
aaggaggaaaacgaggctgattttaagaaaattgttgctgagaatttggtggtcgagcta
cctaggagagaaaggataaggaattacaatgagtctgaatacttcaagcaagcacttcgc
caagcagcaccagctaaacccaaggaactacggattccaaaaatgccaactttgcatgat
ttccagttcttcaacagtcaaagactgaatgagttgtatgaaaaggaagtccgacacctc
gtgcaaaccaaccagaaaaaagataccattgacggtgaagatgaagatcaggtggagcct
tttactgcagaggagctggaggagaagcagcggttattggaagcgggttttgcaacatgg
actaagagagacttcaacacatttattcgtgcatgtgagaaatatggtcgtaatgacata
aagggtatatcctctgaaatggaagggaaaacagaagaagaggttcaacgatatgctgaa
gttttcaaggagagatacacggaactgagtgattatgagagaattatcaaaaacatcgaa
aggggtgaggcaaggataactcgcaaggatgagattatgacagccattgggaagaagttg
gaccgctataagaacccatggttagagctgaaagttcagtatggcacaaacaaagggaag
ttctacaacgaggaatgtgaccgttttatgctatgcatggcacacaagcttggttacggg
aagtgggatgaacttagatctgccttccgcaagtcacccttgttccgattcgattggttt
gtgaaggcgagaagtgcacaagagctggctaggcggtgtgacacgcttgtccgtctagtt
gagaaagagaatcaagaatacgatgagcgagagaggcaggcacggaaagagaagaggctt
gctaagaagatgacaccaacgaagcaaaagatgacgccgacaaagcagaagacgacgccg
acaaagcagaagacgacgccaacaaagcaagctgcatcaagggtttcagatggcgagacg
gccccagcgaatccatccaagaagaataagacgccaacaaagcagaagatgacacctaca
aagcgagctggtgagacggctccagcggcctcatccaagaagcgacggcagtcccttatg
gacgactttctgggctcgggaaagaaggggaaggcgtaa
DBGET
integrated database retrieval system
