Triticum dicoccoides (wild emmer wheat): 119267029
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Entry
119267029 CDS
T07278
Name
(RefSeq) uncharacterized ATP-dependent helicase C29A10.10c-like
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119267029
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119267029
5.6.2.5 RNA 5'-3' helicase
119267029
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119267029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
119267029
NCBI-ProteinID:
XP_037404235
LinkDB
All DBs
Position
1A:complement(220171449..220182715)
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AA seq
1368 aa
AA seq
DB search
MGSRGRMLFDLNELPTEADEEEAAVVVSQPQLPVPNMYPSNLFPPQEVPWSQGILNNHAF
NHASSGSGFQPFVRSTDPQNVKNSMNTEENLDATAASTSVVTNNLSDSVVCPTGPSNQVP
QSVEREEGEWSDADGASDTAGSSVSNKEESAGTASTQVKRESQESGPAIVKSTDVIKDDI
APEPGDTEMSDVSKGPVLHGLTGLESMKTSESKGSQPVDDLDQCTKSKDVRGVEASYALK
CTNNPAKRPKLDDHKVAMLGKKRARQTVFINVEDAKQAGTMKTITPRRQSSFPAPIVTRT
VKEASRGVGERAADKQNLPVIRDQRQSEMIGPERSNSADPCDQNGESNGDFELGSHGRSK
KMNAEEPPSDSYQQSVPRQAFSKQPTDSKQFKGRPVSSQRALLTGQHTADQKPANKRSLV
PKKQASVNNTQYNDTSVERFIREVTNGKFWHNPEEEELQCVPGSFDSAEEYIRVFEPLLF
EECRAQLYSSYEESLEAVSRDAHVMVRVKSVDRRERGWYDVIVLPTHEYKWTFKEGEVAI
LSSPRPGSAAQSSRSNRKTAASNEDAEADCGRLVGTVRRHMPIDTRDPIGATIHFYAGDS
FDCSSETDVLRKLQPRSTWYLTGLGSLATTQREYVALHAFRRLNVQMQNAILQPSPEHFP
KYQEQPPAMPDCFTPSFSDHINRTFNGPQLSAIHWAAMHTAAGTSNGVVKKQEPWPFTLV
QGPPGTGKTHTVWGMLNVIHLVQYQHYYAALLKKLAPESYKQVGSTTNSSSEAFAAGSID
EVLQSMDQNLFRTLPKLCPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARV
GVDTQSRAAQAVSVERRTEQLLMKGRDEVIGWLQQLKGREQQLSQEIGLLQRELNIVAAA
GRSHGSVGVDPDVLAHRDRNRDILLQKLAASVESRDKVLVEMSRLLILESRFRVGSNFNL
EDARSSLEASFANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLALG
AARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPS
RYFYQGRLTDSESVVKLPDELYYKDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFAL
RLYEHLQKLVKVNGGKKASVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQGQ
ERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGNASALMQSEDWAALVADAK
ARKCFMDLDSIPKDFLAMKISSNTPGRNTSNNLRNLRTGGPRPRHLDMLPDPRIGMRADE
DERPNSVPRNASYRNLDDLGRSGDRSRESLQFGVAKRPNSSNGSRREV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggggtctcgtggaaggatgttatttgacctcaatgagctcccaacagaagctgatgaa
gaagaagctgctgttgttgtgtcccaacctcagcttcctgttcccaatatgtatccctca
aatttgtttccaccacaagaagtgccttggtcacaagggatattaaacaaccatgccttt
aatcatgcatcttctggttcaggttttcagccttttgttagaagtacagatccacaaaat
gtaaagaattctatgaatacagaagagaatttggatgctactgcggcttctacatctgtg
gtaactaataatttatctgatagtgttgtgtgtcctactgggccctccaatcaggttcca
caatcagttgaaagagaagagggagagtggtctgatgcagatggtgcttctgacacagca
ggtagtagtgtcagcaacaaggaagaatctgctggtactgcaagtactcaagtgaaaaga
gaatcccaggagagtggacctgctattgttaaatctactgatgtgattaaagatgacatt
gctcctgaacctggtgacactgaaatgtctgatgtgtctaaaggtccagtccttcatggt
ctgacaggactagagagcatgaaaacgtctgaatctaaaggaagtcaacctgtggatgat
ttggaccagtgcactaagtcaaaggatgtcagaggagtagaagccagttatgcattgaag
tgcacgaacaaccctgcaaagagacctaagttagatgatcacaaagttgcaatgcttggt
aaaaagcgagcgaggcagactgtgttcatcaatgttgaggatgcaaaacaagctggcaca
atgaagacaattacaccgaggagacagtcatcttttccagcaccaattgttacacgtacc
gtgaaagaagcttctcgtggtgttggtgaaagagctgcagacaagcagaacctacctgtc
atcagggatcagagacaatctgagatgattggtccagaaagaagtaattctgcagatcct
tgtgaccaaaatggagaatctaatggtgattttgagttgggatctcacggcaggtcaaag
aaaatgaatgccgaagaacccccctcagatagttaccaacaatctgtgccaaggcaggcc
ttttcaaagcagcccacggattccaagcagtttaaaggcagaccagtctcttctcagaga
gcacttctaacaggacaacatactgcagatcagaagccagctaacaaaaggtctcttgtt
ccaaagaagcaagcttcagttaataacacacagtataatgacacatctgttgaacgattt
atacgggaagtgacaaatggcaagttctggcacaatccagaggaggaagaacttcagtgt
gttcctggaagctttgattctgccgaggagtacattagagtttttgagcctttgcttttt
gaggaatgcagagctcagctatatagttcctacgaggagagtcttgaggctgtatcaagg
gatgcacatgtaatggtgcgcgtgaaaagtgtggataggcgtgaaagaggatggtatgat
gttattgttttgccaacacatgaatataaatggacttttaaagaaggagaagttgcaatt
ttgtcgtccccccggcctggttcagctgcccaatcaagtagatctaataggaagaccgct
gcttcaaatgaagacgctgaagctgactgtggacggcttgtaggtacggtcagacgccat
atgcctattgatacgcgtgatcccattggagcaactatccatttttatgctggggattca
tttgattgtagcagcgagactgatgttctgaggaaactgcaacctcgaagcacctggtat
ctaacgggtcttggttcccttgcaacaacacaaagggaatatgtagcattacatgcattc
cgccgtcttaatgtgcagatgcaaaatgcaattcttcagccaagtccagagcacttccca
aaatatcaagagcagccgcctgctatgcctgactgtttcactccaagtttttctgatcat
atcaatcgtactttcaatgggcctcagctatcggctattcattgggctgcaatgcacaca
gctgctggtacaagcaatggagtggttaagaaacaagaaccatggcctttcacattagta
caaggtcctccggggacagggaaaacccatactgtgtggggaatgttaaatgttattcat
cttgttcagtatcaacattactatgctgctctgctaaagaaacttgcccctgaaagttac
aagcaagttggtagtaccactaacagcagctcagaggcttttgccgcagggtctattgat
gaagttttgcagagcatggatcagaaccttttccgcactcttcccaagctttgccccaaa
ccacggatgcttgtgtgcgccccatcaaatgctgcaacagatgagctgctttctcgtgtt
cttgaccgaggtttcatagatggtgagatgaaggtttaccgccctgatgttgcccgtgtt
ggagttgacacacagtctcgtgctgcccaagctgtatcagttgagcgacggacggaacag
cttttaatgaagggccgtgatgaagtaattgggtggttgcagcagctaaaaggccgtgag
cagcagttatcacaggagatagggcttctacagagggaacttaatatcgttgcagcagct
ggtagatcccatggttcggttggggtagatcctgatgtgctagctcacagggatcgtaac
cgtgacattctgcttcaaaaacttgctgcctctgtagaaagcagggataaagtacttgta
gagatgtcaaggctgctgatattagaaagcaggttccgtgttggcagcaacttcaatctg
gaagatgctaggtctagtctggaagccagtttcgccaatgaagcagaaattgtttttaca
acagtgtcaagcagcgggcgcaggttattttctcgccttagtcatggttttgatatggtt
gttatcgatgaggctgctcaggccagtgaagttggagtcctccctccacttgcacttggt
gccgctagatgtgtcttggtaggtgatccacagcagctccctgccactgttattagtaaa
gcggctggaactttactctatagcaggagcctttttgagaggtttcagcaggctggttgc
cctaccattttgttgtcagtgcaatatcggatgcatccccagatccgagagtttccatca
cgatacttttatcaaggccgccttacagacagtgaaagtgttgtcaaactgcctgatgag
ttgtattacaaagatgcattaatggcaccttacatattttatgacatctcacatggtcgt
gagtctcatagaggtggatcatcttcataccagaatgttcatgaagctcagtttgcattg
cgtttatacgagcatcttcagaagcttgtgaaagttaatggtggtaagaaggcatctgtt
ggtataatcactccatataagttgcagttgaagtgtcttcagcgggaatttgaggaggtc
atgaatactgaggaagggaaagatatctacataaacacagtagatgcttttcaaggccag
gagcgtgatgtgattatcatgtcatgcgtgcgtgcttcaaaccacggcgtgggttttgtt
gcagatatacggcgcatgaatgttgctcttactcgagctaggagagctctatgggttgtt
ggtaatgccagtgctctcatgcagtcagaggactgggcggcgctggtagcagatgcaaag
gccagaaaatgtttcatggacttggatagcatccccaaggactttcttgccatgaagatc
tcttccaacactccaggaaggaatacttcaaacaacctaaggaacttgaggactggtgga
ccaagaccgaggcatctggacatgcttccggaccccaggattggcatgagggctgatgag
gatgagcgtcctaactctgttccaagaaatgctagttaccggaatttggatgacctggga
cgatctggtgatagatctagggaaagtttgcagtttggagtggccaagaggccgaattca
tccaatggttctcggagagaagtctga
DBGET
integrated database retrieval system
