Triticum dicoccoides (wild emmer wheat): 119267094
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Entry
119267094 CDS
T07278
Name
(RefSeq) protein RST1-like
KO
K27498
focadhesin
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119267094
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119267094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
119267094
NCBI-ProteinID:
XP_037404304
LinkDB
All DBs
Position
3A:57601956..57615833
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AA seq
1831 aa
AA seq
DB search
MASASSGAAAFSRLVDRTRVPDPTLQRHAVAAFFRHLLTLPPPLPAAAHDGISSLLASPH
AAVAAYASASLARLAVSRTDLLAPDEALPFLIASLSASPSPRLASCLVKAVAALVSCVLR
SGPVDSRFPPHNHPFVQALASGADGARAELSRQAARMVAEGVDGVVGFLRPLVMFGVVRK
GDAAFARDLIGALAAAATAAGKSDLAVPVLKLLGQSLLHFGRGDGEEGRLWLSSVECLVD
AYVILLRKLAHAQRPAYDAQASSVELLEILLSQCSLHHQLLGMSCAVLGLSKYLFSVQKN
LGLCYLPEISGVLSSLSCILSALEFESEQLAGLKLLAFLVEWRHENALKTNEVVHHFSEE
LLCVLPVINLVISPSRSVKAVASHVLSRFSLLVLELPASCSSEQQDISMVHHISRPTFIL
PKLVHHLWSQSSSGFFFTKYAICKGLPESAVNYSEANYWTDQINEYLSVLAREKLTLDGS
SSKTMSSVAISSLVSSVVSVLVMHPKLGTSAAPSLGNLGASDSKLGMPLLLVILFYCKIM
YSNDNFSANSLLSLLESLPSLATHGFVLPLALQLISPMLKKDAKSTLYAIAVRLLCKIWF
ITDWAFPNLQGVLDPETFSSFTTDREVFTSIAASVRDVCKQNADRGVDLILSVSSCIESR
DSVVQALGLESLSYLCEADIVDFYTAWKVISKELTDYSVNPTVSNGLCILLRWGAMDAEA
YSETSKNLIQTLWSIGTYKKSNAEADRLWIKARGTAFHSLSHYKISLIQDSIPDFWRRNY
ESFTNEHNMEVLKAMENFQVEIIKFEHINRRRVTADKRTMVHKFEKLLDVLPQAVFKEKS
AHHRLPGAALLTIKFSSEDILREGKSKDLSRVHAAYEQALMEMAESMFISRNIVVALLAL
HSWKSFVSHWMQAVVTLLDTKESSKLNKLLKAANDIFKILCKCVPVSNPRVAVNITLAIG
ALCLVVPPTAHLVISSASDFLLKWLLQYEHEHQQWSAAISLGLIFNCFHPTDKKSKLQVI
NGLFEVISNADSYLVKGACGLGLGYACQGLLTRADKSDSDLEATTQLNERASVKEILHTV
TASLVRLCPSSCYSLKKLSICGTFSMEGMEENCDSLDDDPWAIAGLVLGLGNSVVALYRL
GAYEDVIELKNILISWIPDVDSSSVLFDEVNSVSLCMGSCLALPSVIAFCQRVELLNDDL
DALFNRYTSLATELLNLKKSGTVFQNLLMAICIGAGSLLSGILNDGVHAMKFADVKKFLD
TLKNIYTHPYPPIVHLGGMFGAVNAFGAGAGDLTGIGWQSMNSQIKHEKESSLVRGPLLT
SPVGETLSTSMVQEIFLLAKDAEDNHIRNYAAWAVSFLRSRWLLKNQSLNVNDSSQRNSV
DSSQSTSFSAENLVWNLSLWLRDLNFEKPGDVVPVNTIATVLKCLTKAPRVPAIDWGVIV
RRCMKVEAQIPHKSNNHRDPTLLREECLYFSLAHADHISPLLQFLDDLTDLPRFRRLEMN
VQSVLLQYLSHLMKLFSDSRSKKLYDDLAVYFCSHSSSYLDYSPEQRSMLRMSFWKGICK
CLVEVVSEETDSFSYVKKCIEWLLPLLNLCNDGQPEFVDEWSAAIKCLIVAQKSWSSDML
QVHSTTSLSEGEHVDAARKIIIRARLCFAGCVSALELGNIKTTILSTTADGVWWNVLVEV
AAAVYSADNGIKKQWLLDALDIGCVTAHPSTALRFVGLLCGSCCIYMPLLIVNPTNVLSD
LPVTLPSFLSSSIWDDLRNSATDKLWLLTTRIYTWAEQLTRGEGLPCHDHIHGSEAENAT
FLANMLRSTCIAVEDHLAVDKQLKLANLEAL
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcctcgtccggcgcggcggccttctcccgcctcgtcgaccgcacccgcgtc
ccggaccccacactccagcgccacgccgtcgcggccttcttccgccacctcctcacgctg
ccccctcccctccccgcggccgcccacgacggcatctcctccctccttgcttccccgcac
gccgctgtcgccgcctacgcctccgcgtccctcgcccgcctcgcggtctcccgcaccgac
ctcctcgcccccgacgaggccctcccgttcctcatcgcatccctctccgcttccccgtct
ccccgcctggcctcatgcctcgtcaaggccgtagccgcgctcgtttcctgcgtcctccgc
tcgggccccgttgactcacgcttcccgccccacaaccaccccttcgtccaggctctcgcg
tcgggcgctgacggcgcgcgcgcggagctgtcgcggcaggcggccaggatggtcgccgag
ggggtcgacggcgtggtggggttcctgaggccgctcgtgatgtttggcgtggtgaggaag
ggggacgccgcgttcgcgagggatttaatcggcgcgcttgccgcagcggccactgcagcg
ggcaaatcggatttggcggtcccagtgctcaaattgctcggccagagcttgctgcatttc
ggccgcggggatggggaggaagggcggctctggcttagttctgtggagtgcttggtcgat
gcatatgtgatattactgaggaagttagctcatgctcaaaggccagcctatgatgcccaa
gcaagtagtgtggagttgctagaaatacttttgtcgcaatgttcacttcatcaccaactt
ctgggaatgtcttgtgcagttcttggattatcaaaatatttgttttcggtgcaaaagaac
cttgggttatgctatcttcctgaaatttctggtgttctcagttctctttcctgcattctc
agtgcgctggagtttgaatctgagcaactggctggattgaaacttctggcctttttggtt
gaatggagacatgaaaatgcgctcaaaacaaatgaagtggtacatcacttcagtgaggag
ctactctgtgttctgccagttatcaacctcgttatttctccatcgagatctgttaaagca
gtggcatcccatgtcctgtcaagatttagcttgcttgttttggagttacctgcttcttgt
tcatcagagcaacaagacatttcaatggtccaccacataagcagacctacctttatcctt
cctaaacttgtacatcatctatggtctcagtcatcttcaggtttcttttttacgaagtat
gcaatttgcaagggattgccggagtcggctgtgaactattcagaagctaattattggacg
gaccaaataaacgagtatctgtcagtccttgccagagaaaagcttacactggatggctca
tcttcaaaaacgatgtcatcagtagcaatatcatcgcttgtaagctctgtagtatctgtt
ttggtaatgcacccaaaacttggtacttctgctgctccttccttgggtaatcttggcgca
tcagattcgaaactgggaatgccgctgttgctagttatactcttctattgcaagattatg
tacagcaatgataacttctcagcaaatagcttgctcagtttgcttgagtcgttgccatca
cttgctacacatggttttgtgcttccacttgctctgcaattgatatcaccaatgcttaaa
aaggatgcaaaatcgactctatatgctattgctgttcgattgctttgcaagatatggttt
atcacagattgggcatttccaaacttacaaggagttctggatcctgaaacattttccagt
ttcactactgatagagaagttttcacaagtattgctgcatcagtgcgtgatgtttgcaag
cagaacgcagatagaggtgttgatctcatattatctgtctcgtcttgtattgagagccgt
gattctgtagttcaagctcttggcctggagagcctctcctatctctgtgaggcggacatt
gtggatttttataccgcctggaaagttatatcaaaggagctgacagattattcagtcaac
cccacggtttcgaatggcttatgcattctgttgagatggggagcaatggatgctgaagca
tactctgaaacatcaaagaacttgatacaaacattgtggagcattggtacatataagaaa
agtaacgccgaagctgatcgtctttggattaaagcaagaggaactgcttttcactcattg
tcccactacaagatctcacttattcaagattctattcctgatttctggagaagaaactat
gagagctttactaatgaacacaatatggaagttctcaaagccatggagaactttcaagtc
gagattatcaaatttgagcacataaaccgccgtagagtaactgcagataaaagaaccatg
gtgcacaaatttgagaagttattggacgttctccctcaggccgtgtttaaagaaaaatct
gcacaccatcggttgcctggtgcagctcttttaaccatcaagttttcctcagaagacatc
cttcgtgaagggaaatctaaggatttatctagagtacatgctgcatatgagcaagcatta
atggagatggctgaatctatgtttatatcaagaaacatcgtggtagctcttcttgccttg
cattcatggaaatcatttgtttcccattggatgcaggcagttgtaactttgctcgacact
aaagaatcttcaaagttgaataaactattaaaagcagctaacgacatttttaagatattg
tgcaagtgtgttcctgtatctaatcctagagttgccgttaacattactcttgcaattgga
gcactgtgcttggtagttcctccaactgcccatctagtaatctcatctgcatcagatttt
cttttgaaatggttactgcaatatgagcatgagcaccaacagtggtctgcagctatctct
ttgggactaatattcaactgttttcatcccacggacaaaaaaagcaagcttcaggttatc
aatggactctttgaggttatctcaaatgctgatagttatcttgtaaaaggagcttgtgga
ctgggattaggttatgcttgccaaggtcttctaaccagagcagataaatctgattcagac
ttagaagcaactacacaactcaacgagcgtgcatcagttaaagaaattcttcacactgtg
actgcttcattagttagactatgtccatcctcatgttattctctcaagaaactaagtatt
tgtggaacattctccatggaaggaatggaagaaaattgtgacagcttagatgatgatcct
tgggctattgcgggacttgttcttggtctgggaaactctgttgttgctctgtataggctt
ggagcttatgaagacgttattgaactcaagaatatattgatatcatggataccagatgtt
gattcaagctctgtgttatttgatgaagtaaattcagtatccctatgtatgggctcttgc
cttgctctgccatctgtcatagcattttgccagagagtggagttactgaatgatgatttg
gatgctctgttcaatcgctacacttctttagctactgaactcctgaacctcaagaaatct
ggaactgtctttcagaatttattgatggctatctgtatcggtgctggatctttgctgtct
ggcatattgaatgatggggtgcatgccatgaaatttgctgatgttaagaagtttctcgac
acccttaaaaatatatacacccatccgtatcctcctattgtccatttgggaggcatgttt
ggtgctgtcaacgcttttggtgcaggtgctggagacctcactgggattggttggcaatca
atgaattcacagataaagcatgagaaggagtcatctttggtgcgaggtcctctacttaca
agtcctgttggcgagactctttcaacgtcaatggttcaggaaatatttcttcttgccaag
gacgcagaggataatcacatacggaattatgctgcgtgggctgtatcatttcttagaagt
aggtggttattaaagaatcagagtcttaatgttaatgattcttctcaaagaaattccgtt
gattccagtcaatcaacaagtttttctgctgaaaacttagtgtggaacttaagtctctgg
ctgagggatcttaactttgaaaagcctggtgatgtggtgccagtaaatacaattgcaaca
gttctgaaatgccttactaaagctcctagagtgccagctatagactggggggttatagta
cggcggtgcatgaaagttgaggcacaaattcctcataagtcaaacaatcatcgagatcct
acattattaagggaagaatgcttatatttttctctagctcatgccgatcatatcagtcct
cttctgcagtttttggatgatctgacagatttacccaggttcaggagattagaaatgaac
gtgcagtctgttttgctccaatatttgtcacacctaatgaagctcttctctgattcaaga
tctaagaaactgtacgacgatctagctgtgtacttctgttcccactcatcttcatacttg
gattactctcctgagcagagaagcatgttaagaatgtcgttctggaaaggcatctgtaag
tgcctggtggaggtggtctctgaagagactgacagtttctcttatgttaagaaatgcatc
gaatggttgttacctctgttgaatctctgtaatgatggtcaacctgaattcgtggatgag
tggtctgctgctatcaagtgtctcattgttgctcagaaaagttggtcaagtgatatgctg
caggtgcacagtaccacatccttaagtgaaggggaacatgttgatgcggcaaggaagatt
atcatcagggcaaggttgtgttttgctggttgcgtttctgcacttgagctggggaacata
aagactaccatactgagtacaacagctgatggcgtctggtggaacgttcttgttgaggtt
gcagcagctgtatactctgctgacaatggtataaagaagcagtggcttttggatgcatta
gacattggttgtgttacagctcatccctccacggcactgcgttttgttggcctgctatgt
ggtagctgttgtatctatatgccacttctcattgttaatccaacaaacgtactgagtgat
ttgcctgttacactgccttcctttctctccagcagcatttgggatgaccttagaaactct
gccactgataagttatggttgttgaccactcgcatctacacatgggcagaacaattgact
cgtggagagggccttccttgccatgatcatattcatggaagtgaagctgagaacgcaact
tttcttgcgaacatgctgcgctctacatgcattgcggtggaagatcacttggctgttgat
aaacagctaaagcttgcaaacctggaggcactatga
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