Triticum dicoccoides (wild emmer wheat): 119267143
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Entry
119267143 CDS
T07278
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119267143
03460 Fanconi anemia pathway
119267143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119267143
03036 Chromosome and associated proteins [BR:
tdc03036
]
119267143
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119267143
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119267143
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119267143
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119267143
FA (Fanconi anemia) pathway
Downstream FA components
119267143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
119267143
NCBI-ProteinID:
XP_037404369
LinkDB
All DBs
Position
3A:62210474..62222425
Genome browser
AA seq
1633 aa
AA seq
DB search
MPGRWRVWGQPDGRLVWIPAPEPDAPPPPAAAPPLPPPLPLGRGAGIAADPSEDALAKGR
GAADGCRVESMADLLVQARNTLLEGDGMSGATVDAGEGQLFCTGSGRSVSVSERAIRRAR
ALVGEEVEKAGNKRKQPFDDVPGAEGESREMDAPFRGGVHNTTVPPVFQTGSGKAVLLGK
DSIQKARAILGEQPFDHVPDAEGELSEMDAPFRGGVYNTTMPPVFQTGSGKAVLLGKDSI
QKARVLLEDVDSAAGAVQPMFCTGMGRPVPMSRTSIDKARAVLEGQIVAEKGVDGMEQFP
LFQTGSGRVVSVTAASVQKAKSVLKDNNTREENTESFGRPNQPMMFQTGSGRPAMISERS
IERSRAVANEGDAEKSGHWDTDCQFPVFQTGLGKPVAVSWSSVQKAKAVLEEEKIKTTGR
GESSDCATTLQTETPTSVLMSSSLIMNSRSVTPKEDSAMQVTRTEKNHKDDDHVPLFQTG
LGRSIAISKSSLKRASAVLEPRNIAKELEDEAHLDGAHDTPAFRTGLGRSILASENSRKE
LPILEAEEAVKSVNNYNRETFVEEATFQAGIQKFVPQNRISSHKASMLLEQRNFMEKGYK
DSGSQLPLFRTGSGKSVLISESSVQKARAVLEEQGINKDNHKLLNMDKKIPVFASPLKTS
CARTVNISSVGVSRAATLLGLEENTLSTQFFGHVGDKLGTKINFEQENAEQRLGLASYPT
ENQVHKEPHRPFELSNNTISDSGEHSIRFSTAGGRSMAISSDALERAKSLLGESDLVVST
NNLVSYPLGSACNDKMQNSTVVPKEGGSDLSKRRRVSGRTELATFSHQAMSDRKDTGSFG
NAVSDIHPTSENTNRFHVGSRSTSEIPKIVKSSSRCLSETDNTNDTKDKTQQLHMPAGAL
FDISNFMGSYSGNIDHVVNEKRRILGRNSASSFKRPRSSRFITPISTNRQSSAGVPKPPP
TQITSCRTKLSAYYPFQHKRKTWKEYFGGPPCFNCLAEHIIDEVKLMDAKGAEKYKFHNM
NTGAEEFQKLLIACGASLTYATKEWVNNHYKWIVWKLGSLERCYPTKAAGKFLTVANVLD
ELKYRYDREVNNGHRSAIKKIVEGNALPSLMMVLCISAIYSHPDVNKLEAVGTDGNENSI
ENKSLLAAKRNMPAHIELTDGWYALEASLDVALSEQLQKRKLFIGQKLRIWGASLCGWTG
PVSFHEASGTVKLMVHVNGSYRARWDDPLGFCKHVGPPLAFKCIKASGGRVPRTLVGVAR
IYPVLYKERLPDGSSIVRSERMERKALQLYHQRVSKIAEDIMSEQDENCASTDDSEEGAK
ICKMLEQAAEPEVMMAGLTSEQMISFSSYQAKQKEARQNEVAKKVENALEVAGLSSRDVT
PFLKVRVTSLAHKISATKTINKEGLITIWNPTEKQKADLVEGQVYIATGLLPSAHCTNIL
YLHARGSSTMWKPLASAQAADFQPFFTPRKAVELSLIGEVPLASLSCSEFDIAGVVLHVG
EVYLCSNQKRQWLFLTDGSKFISASQSTEQDDCLLAVSFSCSSASDDGAFFSYALSGNTV
GFSNLVKRQKDQTRHIWVAEATQNSTFTLSHEISKKSHLKEAATCAEKWASSSFDKIQQL
KEKVLCIIGDSGG
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaggtggcgggtctggggccagcccgacggccgcctcgtctggatccccgcc
cccgagcccgacgcgccgccgccgcctgccgcggctccgcctcttcctcctcccctgccg
ctggggcgcggtgcggggatagccgcggatccatccgaggacgcgctggcgaaaggccgg
ggcgctgccgacggatgccgcgtcgagtccatggccgacctcctcgtgcaagctcggaac
acgctgctcgaaggtgacgggatgtccggagcaactgtcgatgcaggagagggtcagctg
ttctgcactggatcagggaggtcagtgtctgtcagcgagagggctataaggagggccagg
gcgttggtcggggaggaggtggagaaggctggtaacaagagaaagcaaccatttgacgat
gtacctggtgcagagggcgaatcgagagaaatggacgccccatttagaggtggagtgcat
aacactaccgtgcccccagtgttccaaactggatccggaaaagcggttttgctgggcaag
gactcgatccagaaggcaagagctattttaggagagcaaccgtttgaccatgtacctgat
gcagagggcgaattgagtgaaatggacgccccatttagaggtggagtgtataacactacc
atgcccccagtgttccaaactggatcaggaaaagcggtcttactgggcaaggactcaatc
cagaaggcaagagttcttttagaagatgttgatagtgctgctggtgccgtacaaccaatg
ttctgtactggaatgggtaggccggttcctatgagccggacctctattgataaggcaaga
gctgttttggagggacaaatagttgcagaaaaaggtgtggacggcatggaacagtttcca
ttgttccaaactggttcaggaagagttgtctcagtcactgcggcatctgttcagaaagct
aagtctgttttgaaggataataatacacgcgaggaaaatacagagagttttggtaggcct
aaccagcctatgatgttccaaactggttcaggaagaccagccatgatcagcgaaagatcc
attgagagatctagagctgtggcgaatgagggagatgcggaaaagagcggacattgggat
actgattgccagttcccagtgttccaaacaggattagggaagcctgttgctgtgagctgg
agctcagttcagaaggcaaaggcagtattggaggaagaaaaaattaaaacaactggacgc
ggagaaagcagtgattgtgccacaactcttcagactgaaacaccaacgtctgttttgatg
agtagcagtttgatcatgaatagtagaagtgttacaccgaaggaagatagtgcaatgcaa
gtcactcgaacagagaaaaatcacaaggatgatgaccacgtgccattgtttcaaactgga
ctagggaggtcaattgctataagtaagagctcacttaagagggcatctgcagttctggag
ccaaggaatattgcaaaggaattggaagatgaagctcatttagatggtgcccatgacact
ccagcgttcagaactggattaggaaggtctatcttagcaagtgagaactctagaaaggaa
ttgcctatcttagaggctgaagaagcagtaaaaagtgtaaacaattacaacagggaaacc
tttgttgaagaggcaacgttccaagctggaatacaaaagtttgtaccccaaaatagaatt
tcaagccataaggccagtatgcttttggagcaacgaaacttcatggagaaaggatacaaa
gactctggaagtcaactgccattgtttcgaactggatctggaaagtcggtcttgattagt
gaaagctcagtacagaaagcaagggctgttctggaggaacaaggcataaacaaagataat
cataagctccttaacatggacaaaaaaattcctgtgtttgcgtcacctctcaagacaagc
tgtgcaagaacagtaaatatatcttcagttggcgtgtctcgagctgctactttgttgggc
ttggaggagaataccctttcgacacaattttttggacatgtgggggataagctgggcaca
aaaataaattttgagcaggaaaatgcagaacagaggcttggtcttgcatcttatccaaca
gaaaaccaagtgcacaaggaaccacaccggccatttgagctttctaataacacaatttct
gattctggtgagcattctatcagattcagtaccgccggaggcagatcaatggctatttct
agtgatgcacttgaacgtgcaaaaagccttctgggtgaatcagatctcgtggtttcaaca
aataatttagtaagctaccctttgggatctgcttgtaatgataagatgcaaaattcaact
gttgtgccaaaagaaggcggatctgatttatcaaaaagaagaagggtcagtggaagaacc
gaacttgcaacattttcccaccaggcaatgtctgataggaaggacactggatcctttgga
aatgctgtatctgatatccatccgactagtgaaaacaccaataggtttcatgttgggagt
cgttcaaccagtgaaattccaaagatcgtgaagtcttcttccaggtgtttatctgaaact
gacaacacaaatgacactaaagataagacccaacaactccatatgccagccggagcgttg
tttgacatcagtaacttcatgggttcatattctggaaatattgaccatgttgttaatgag
aagagaagaattttgggaagaaactccgcatcttcctttaaacggccccgctcttccagg
ttcatcacgcctataagcaccaacagacagtcctctgctggagtacccaaaccaccacca
actcagatcacttcctgtcgaacaaagctgtctgcatattatccttttcaacataaaagg
aaaacttggaaagagtatttcggtggtcctccctgcttcaattgtttggcggaacatata
atagatgaagtgaagctcatggatgcaaaaggagctgagaagtacaagtttcacaatatg
aatactggtgcagaagaatttcagaagttgctgattgcctgtggggcttcattgacatat
gcaactaaagaatgggtgaacaatcactataaatggatcgtatggaaacttggttcactt
gagagatgctatccaactaaagctgctggcaaattcttgacagttgctaatgttttagac
gagctgaagtacaggtatgacagagaagtgaacaatggccatcgatcagccataaagaaa
attgtagaaggaaatgctttgccatctttgatgatggtgctgtgcatttcagctatttat
tcccatcctgatgtaaataagttagaggctgtcgggacagacggaaatgaaaacagtatc
gaaaataaaagcttgttagctgctaaaagaaacatgcctgcacacattgaattaactgat
ggatggtatgcactagaagcgtcattagacgtggcactttcagaacaactacagaaaaga
aagctttttataggacaaaagcttcggatatggggagcttctttgtgtggttggactggg
cctgtgtcatttcatgaggcatctggcaccgtcaaattgatggtccatgtgaatggcagt
tatcgtgcaagatgggatgatcctttgggattctgcaagcatgttggacccccactggcg
ttcaagtgcataaaagcttctggtggccgagtccctaggacactggtaggagttgcaaga
atatatcctgttttgtacaaggagaggttgcctgatggtagttctattgtgagatctgaa
aggatggaaagaaaggcactacaactgtatcaccagagagtatctaagatcgcagaagac
attatgtctgaacaagatgaaaactgtgccagcactgatgacagcgaggaaggggcgaaa
atttgcaaaatgttagagcaggcggctgagcctgaagttatgatggctggcttgacctca
gagcagatgatatctttctcatcttatcaagcaaagcaaaaggaagccaggcaaaacgaa
gtagctaagaaggtcgaaaatgctctggaagttgccggccttagttcaagagatgttacg
ccatttttgaaagtgagggtgacgagccttgctcacaaaatctctgctacaaaaaccatc
aacaaggaagggctaataacaatttggaaccctactgagaagcagaaagccgacctggtg
gagggacaagtctacatcgccacaggattgctgccttctgcccactgtacgaacattctt
tacttgcatgctagaggatcatctacaatgtggaagccattagcatcggcacaggctgca
gattttcaaccattttttaccccacgtaaggcggttgagctgtcattgattggtgaggta
ccacttgcaagtctttcttgcagtgaatttgacattgcaggtgttgttttgcatgtcggc
gaagtttacttatgcagcaaccagaaaaggcagtggctctttttgacagatggatccaaa
tttatctcggcatcgcagtccacagagcaagatgattgtcttctagcagttagcttttct
tgctcatctgccagcgacgatggtgcctttttcagttatgccctttctggaaatacagtt
ggtttcagtaacttggtcaagcgacagaaggaccagacaaggcacatatgggtagccgag
gcaacacagaactctacattcactctttcccatgagatatcaaaaaaatcgcatcttaag
gaagctgcaacatgtgctgagaaatgggcttcaagttcttttgataaaatccagcagcta
aaggaaaaggttttatgcataattggtgatagcggtggctga
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integrated database retrieval system
