Triticum dicoccoides (wild emmer wheat): 119267149
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Entry
119267149 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119267149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119267149
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119267149
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119267149
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
119267149
NCBI-ProteinID:
XP_037404387
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All DBs
Position
1A:complement(227327840..227369681)
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AA seq
347 aa
AA seq
DB search
MDMDSVECLSLPDASMDVDDVDSHQHQHHHHSIPIHPVHLAANGGVGGRAFAKMNAGGAA
GAGGVGATAGATGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPT
CRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEGQCSFRPYNCPYAGSE
CAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLH
FEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDS
HDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQPNLEGTCIPNLCS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtggagtgcctctccctcccggacgcctccatggacgtagacgac
gtcgacagccaccagcaccagcaccaccaccacagcatcccgatccatcccgtgcacctc
gccgctaacgggggcgtcggaggacgcgcgttcgcgaagatgaacgccgggggcgcggcc
ggggccgggggagtgggtgctaccgcgggcgccaccggcgggccaccggcgaccagcgta
cacgaattgctcgagtgtcctgtctgcaccaactccatgttcccgcccatccaccagtgc
caaaatggacatactttatgttcgacatgcaaggctagggtgcacaaccgttgccctacg
tgcagacaagagcttggcgacatcaggtgcttggcattggaaaaagtagcagaatcacta
gagcttccctgtaagtactgctctttaggttgtccagaaatcttcccatactacagcaag
ataaaacatgaagggcagtgcagcttcaggccatataactgcccctatgctggttctgaa
tgtgctgtggctggtgatatacctttccttgttgcacatttgagggatgatcacaaagtc
gatatgcacagcggttgcacgttcaaccatagatatgtcaagtccaatccacgagaggtt
gaaaatgccacctggatgctaacagtgttccattgttttggacaatacttctgcctgcac
tttgaggccttccagctcggcatggcaccagtatacatggctttccttcgtttcatgggg
gacgagaacgaagcaaggaactacacctacagcctcgaggttggtggtaacggtaggaag
atggtatgggagggcacccctagaagcattcgtgacagtcaccggaaggttcgggacagt
catgatggcctcatcatccagaggaacatggcgctgttcttctccggcggtgacaggaag
gagctgaagctgagggtgactggacggatctggaaagagcagcccaatctggagggaacc
tgtatacccaacctttgtagctga
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