Triticum dicoccoides (wild emmer wheat): 119267392
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Entry
119267392 CDS
T07278
Name
(RefSeq) exopolygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119267392
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119267392
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119267392
NCBI-ProteinID:
XP_037404670
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Position
3A:complement(104288466..104291803)
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AA seq
438 aa
AA seq
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MSAHAFGKEWKSSQFGVGFRIHDGKKAILRAAAGHGASFLALPLLLLLVVSAEARSAAAA
GRRKGEGTRYSVMAFHAAGDGKTDDSKAFEETWDSACRDSGGATVYVPEGRTFLLGETKL
QGPCKSPITMQVDGDIVAPSSIWGLKSLTSLLAFYRVDNLTVDGSGQIDGRGAPWWDCYN
KKKCHYRPQLVSFSFCNGLRVTNIRLKDSADKHMSVFECSQVQVHNVTVVAPRDSPNTDG
ITMGASDHVRISSCNIHSGDDCVSILTGTTDVNVTDVMCGPGHGISVGSLGGAGEKQTMV
ERITVSNCNFFNTMTGVRIKSWQGGRGKANTFLFTDLNMTEVRYPIYIDQFYCPQGNCPE
REGGVAITDARFINIRGTSSEQEAIQILCSKSVPCHGIFLHNVDLSWANHTAPTKAKILN
AQGRVAGKVKPQVRFRGL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcacgcctttggaaaagaatggaagtcttcccaatttggagtaggctttcga
atccacgatggcaagaaggcgatcttgagggctgcagcaggacatggcgcctccttcctc
gcgctgccgctgctactgcttctcgtggtgtcggccgaagcccgatctgcggcggcggcc
gggcggcggaaaggggaagggactcggtacagcgtcatggctttccacgccgccggggac
ggcaagacggatgattccaaggcgttcgaggagacgtgggactcggcatgcagagacagc
ggcggggcgacggtgtacgtccctgaaggaaggaccttcctgctgggagagaccaagttg
cagggaccctgcaagtcgccgatcaccatgcaggtggacggggacatcgtggcgccaagc
tccatctggggcctaaagtcgttaacaagcctcctggccttctacagggtggacaacctg
acggtggacggcagcgggcagatcgacggccgaggtgcgccgtggtgggactgctacaac
aagaagaaatgccattaccggccacagctggtgtcattctcgttctgcaacggtctacgg
gtgaccaacatacgcctcaaggacagcgccgacaagcacatgagcgtgttcgagtgcagc
caggtgcaggtgcacaacgtcaccgtcgtggcgccccgcgacagccccaacacggacggg
atcaccatgggggcctccgaccatgtccgcatctcctcttgcaacatccacagcggtgat
gattgcgtgtcgattctaacgggcaccaccgatgtcaacgtcactgacgtcatgtgtggg
cccggccatggcatcagtgtgggaagccttggaggtgccggtgaaaaacaaacgatggtg
gaaagaattacagtatccaactgcaacttctttaatacgatgaccggtgtcaggatcaaa
tcgtggcagggagggcgaggcaaagcgaacacgttccttttcacggacctcaacatgact
gaagtacggtatcctatctacatcgaccagttctattgcccccagggaaactgtccagaa
cgggaaggtggtgtggccataacggacgcgagattcatcaacatccgggggacgtcctcg
gagcaagaggccatccagatcctgtgcagcaaaagcgtgccgtgccacgggatttttctc
cacaacgtggacctctcttgggccaaccacacggccccaacaaaagccaaaatcctaaat
gcccaaggaagagtcgcgggcaaggtgaagccacaagtacgcttccgcggcctctga
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