Triticum dicoccoides (wild emmer wheat): 119267495
Help
Entry
119267495 CDS
T07278
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119267495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119267495
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119267495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
ELL
DZR_2
SOG2
Motif
Other DBs
NCBI-GeneID:
119267495
NCBI-ProteinID:
XP_037404783
LinkDB
All DBs
Position
1A:243441008..243452022
Genome browser
AA seq
555 aa
AA seq
DB search
MGSVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSALITNLIREY
NVRANASTDKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWI
LEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGSWYNFSKVAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAATNGPAAFGSDMMKLEPANDGEKESARHKKGKDNEGNNSD
KGEENEEEEAARKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEAV
DIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRSSGQNESDADDDDE
EDDVILHSQRFNIYFYFIDKDFFLPLFQQDDESSPVLAPKQTDQPKDEPVDNSPAKPTPS
SGHARSTPPASKSKQKRKSGGDDAKASSGAASKKAKVESDTKTSSIKEETPSSSKPTPKA
SASSRSVNVSPVTEDEIRTVLLAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQ
KTNGHNYVVLREDKK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtagacctggtgctgaagccggcgtgcgagggctgcggctccacgtcggac
ctctacggcactgggtgcaagcacaccacgctctgtagctcctgcggcaagtccatggcg
ctttcccgcgcccgatgcctcgtctgctctgcgctcatcacgaacctcatccgggaatac
aatgtgcgggcaaatgccagcacagataaggcattctctattggaagatttgtaactggt
ttgccgccattctcaaagaaaaagaatgctgagaacaaatggtctcttcataaagaaggc
ctgcaaggacggcagcttactgacaaaatgctggagaaatacaacaggaagccatggatt
ttggaagatgaaactggtcaatatcagtttcaaggtcatatggagggatcacagtcagca
acagctacatactatttgttaatgttgcatggcaaggaatttcacgcatttcctgctggt
tcctggtataacttcagtaaagttgcgcagtacaagcagctgactctggaagaggccgag
gagaagatgaataagagaaagactagtgcaactggttatgaacgttggatgatgaaagca
gctacaaatgggccagctgcctttggttcagatatgatgaaacttgagcctgctaacgat
ggggaaaaagaaagtgctcgtcataagaagggaaaagataatgagggtaataattctgat
aaaggtgaggagaatgaagaagaggaagccgctcgtaaagataggctcgggctctctaaa
aggggcatggatgacgatgaggaaggtggaaaagatctagattttgatttggatgatgac
attgagaaaggtgatgactgggaacatgaagaaacattcaccgatgatgacgaggctgtg
gatatcgacccagaggagcgggcagatttagctcctgaaattcctgctccacctgaaatt
aagcaggatgatgaagagaatgaggaagaaggtggcctgagcaagtcaggaaaggaatta
aagaagctgcttggtcgttcttctggacaaaatgagtcggatgccgatgatgatgatgaa
gaagatgatgtaatactccattcacagagatttaatatttatttttattttattgataag
gatttttttcttcccttatttcagcaggatgatgagtcatctccagtccttgctccaaag
cagacggatcaaccaaaagatgaacctgttgataacagcccagccaaacctacaccttca
tcaggacatgctcgtagtacacctcctgcatcgaaatccaagcaaaagaggaaatcaggt
ggtgatgatgccaaagcatctagcggtgcagcttcaaagaaagcaaaggtggaatctgat
acaaaaacatcaagtatcaaagaggagacaccatcttcctcaaaacctacaccaaaggcc
tctgcttcatcaagaagtgtcaatgtatctcctgtgacagaggatgagatcaggaccgtt
cttcttgcagtggctcctgtcactacacaagatttagtctccagatttaagtctagacta
cgaggtccagaggacaagaacgcctttgctgaaattctgaagaaaatttcgaagatacag
aagactaatggccacaactatgttgtccttagagaggataagaaatga
DBGET
integrated database retrieval system
