Triticum dicoccoides (wild emmer wheat): 119267543
Help
Entry
119267543 CDS
T07278
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119267543
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119267543
Spliceosome [BR:
tdc03041
]
Complex C
Other components
Complex C specific factors
119267543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
AAA_29
AAA_7
AAA_23
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119267543
NCBI-ProteinID:
XP_037404839
LinkDB
All DBs
Position
3A:125852873..125873104
Genome browser
AA seq
701 aa
AA seq
DB search
MSRFWRPGAEKPSASLVDDEEGGVLFLPTNTNASSSSSGFGYASLERLRQRLPVYKYRKA
ILYLVERHATTIIVGETGSGKSTQIPQYLKEAGWAEGGRLIGCTQPRRLAVQTVASRVAE
EVGVKLGEEVGYTIRFEDETNPGMTMIKFLTDGVLIREMMEDPLLSKYSVIMIDEAHERS
ISTDILLGLLKKIQRRRPELRLIISSATIEARSMSAFFSNRRKNSLLKPADDLPNPEPAI
LSVEGRGYTVETHYLEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQDDIDAALKLLN
DEIQHLGKHYFDLVILPLYSGLPRGDQDLIFVPTSKGKRKVVISTNIAETSLTLEGVVYV
VDSGFSKQKCYNPISDLESLVVAPISKASARQRAGRAGRVRPGKCFRLYTEEYYLSEMQS
DGIPEMQRSNLVSCIIQLKALGIDNILGFDWPASPSPEAMIRALEILFSLGILDEDAKLT
VPIGFQVAEMPLDPMISKMILSANDFGCSDEILTIAAFLSVQSVWVSMRGVKKEFDEAKL
RFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVIEIRAQLVRVVKRFGIQL
KSCDRDMQAVRKAIIAGSFANSCHLEEYGQNGMYKTIRTSQEVYIHPSSVLFRVNPKWVV
YQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPNPAPH
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagattctggagacctggggcggagaagccgagcgcatcgctcgtcgacgacgag
gagggcggcgtcctcttcctccccaccaacaccaacgcttcttcctcctcctccgggttt
gggtacgcgtccttggagaggctgaggcagcggctgccggtgtacaagtaccgcaaggcc
atcctatacctggtggagcggcatgccacgaccatcatcgtcggcgagacgggtagcggc
aagtccacgcagatccctcagtatcttaaggaggctggttgggctgagggtggtcgactt
ataggttgcacccagccaagacgattggccgtgcagacggttgcatcaagggtagctgaa
gaagttggtgtgaaacttggagaagaagtaggatatacaataagatttgaggatgaaaca
aacccgggcatgaccatgatcaaatttctcacagatggagtactgattagagaaatgatg
gaagatcctcttctgagcaaatatagtgtcattatgatagatgaagctcatgaaagatcc
atttcaaccgacatattgctgggactcttgaaaaagattcaacgccgtcggccggagtta
cgcctaatcatttcctctgcaacaattgaagcaagatcaatgtcagcctttttcagcaat
aggcggaagaattcattgctcaagcctgctgatgatttgccgaacccagaacctgctata
ctttctgttgaaggtagaggatatacagtagaaactcattatctagaagaacctgtctca
gactacttacaggctgctgtgaatactgttcttattattcacgaaaaggaaccacctggg
gatattttggtgtttttaactggccaggatgacatagatgctgctcttaagttgctaaat
gatgaaattcaacatctgggaaaacactattttgatttggtgattttgcctttgtactcc
ggccttccgcggggagaccaagatctcatttttgttcctacttccaaagggaaaagaaaa
gttgtgatatcaacaaacattgctgagacatcattgactctggagggcgtggtgtacgtt
gttgatagtggattttccaagcagaagtgctataacccgatttctgacctcgagagtcta
gttgtcgcaccaatatctaaagcttctgcaaggcaacgagcaggcagagctggaagggtg
cgacctgggaaatgctttaggctttacacagaggaatattacctaagtgaaatgcagtca
gatggcattccagaaatgcaaaggtctaaccttgtttcctgcataatacagttgaaagcg
ctaggcatagacaacatcttggggtttgattggccagcttctccatcaccagaagcaatg
attcgggctctcgaaattctattttcactaggaatccttgatgaagatgccaaactaaca
gttcccattggtttccaagttgctgagatgcctctggaccccatgatctcaaaaatgatc
ttgtcagcaaatgattttggatgctctgatgagatattgacgatagcagcatttctatct
gttcagtctgtgtgggtctctatgcggggagtgaagaaggaatttgatgaggccaaactt
cggtttgccgctgctgagggtgatcatgtaacattcctgaatatctacaaaggatttcac
cagtctggaaaatctagtcagtggtgttacaagaactttttgaatcaccaagcactgaag
aaggtcattgaaatcagggcacagcttgtcagggtagtgaagaggtttggcatacagctg
aaatcctgcgacagagatatgcaggcagttagaaaggccattattgctggttcgtttgct
aattcatgtcatctggaggaatatggccagaatggaatgtataaaacaattaggacgtca
caagaagtttacattcatccatcttccgtgctctttagggttaatccaaagtgggtcgtc
taccagtctcttgtttcaactgacaagcactatatgcgtaatgtaattgccattgaacca
tcatggcttactgaagctgcaccgcatttttaccagttccgaacacccaatccagctccg
cattaa
DBGET
integrated database retrieval system
