Triticum dicoccoides (wild emmer wheat): 119267696
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Entry
119267696 CDS
T07278
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119267696
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
119267696
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
119267696
Prokaryotic type
119267696
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
119267696
NCBI-ProteinID:
XP_037405022
LinkDB
All DBs
Position
3A:158899183..158913167
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AA seq
1566 aa
AA seq
DB search
MPPQVPSPLRRFLPLSQTLAPAPLLYLSRRLFFSSVSAPRSPFTRAAGIRPLVYRCQASR
HHPRRGNSTARKEPEGMASGGGGGGKDAGVAFNKMRAEGRDVRKDRSMELKNRRANPIST
TSYVQILGTGMDTQDTAPSILLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFFTRVC
SETAGGLPGLVLTLAGMGDEGMSVNIWGPSDLDFLAGAMKSFIPNRAMLHTHSFGVEHSA
SSSQSTEATVIIDDEVVRISAMFVKPRYNNEARNSTDINSKPGDTAIVYSCELAEIKGKF
DPDKAQALGLERGPKYRELQLGNSVKTEAGRMVHPSEVLDPPIPGPIVLLVDCPTQYHMH
ELFLLQSLSRFYEDSSCQTENAKKVNCIIHLGPSSVTNTVDYQNWMKSFGTTQHIMAGHE
NKNMEVPILKGSARISSRLNFVCPQLFPSSGFWPVEPANGIDLEKNKSTSFQACESVTAA
NLLKFRLRPYAQLGLDRASIPSLFSYEEIVDELISEIPEIKEVPEQISKFWQSSVDQKNA
LAPAGKHMLMVEEPWISKDSCLPDILDEQENSAKFQDDSSLRESVWRKRPKGNSETPCCV
ENATREDMEITFLGTGSSQPSKYRNVSSIYINLFARGGMLLDCGEGTLGQLKRRFGVSGA
DEAVKNLRCIWISHIHADHHTGLARVLALRSKLLNGVPHKPLLVIGPKQLLRFLNAYSTL
EDLDMQFLDCRQTLKPSVEELLGDNATESATTQLENTMFAPGSRMENYNKKPSSPKDTTA
LANLKEVLHESGLEILYSVPVVHCAQAFGVVLRAKEKVSSAGKAIPGWKVVYSGDTRPCP
ALVDASRDATVLIHEATFEDSMKDEAIARNHSTTKEAIAVGTSAGAYRIILTHFSQRYPK
IPVFDEDDMHKTCIAFDLMSVNLADLPVLPKVLPHLKLLFKDEMVVEESDEALRLIKYAV
GKSGTDFKREMQRHSAAMRQLVHYKGHPDPLKGDALNKAVRETANEAIAAIFSTEDPKAV
VVTEGLGKRIQGFGNTNYEPSRDDKKSFLSELSEVVGIGGASIKQGLSNFAATHSMMPND
NGGMYKNPIRRSLTTETDRYGRYDPSEIQGESRATSGASKNVSSGSWGPSPSSSASAGDT
ESSQPGIKTREERLLETIVTASGVRLQPTRDALQIFLTEASKLDAVALSRALESKLNSPL
WQVRMKAICVLEAVVRKQDTDPYSIVASYFSENSASVVRCCELPQVSLREKASKVLNLLV
GEQPTGSKHLSESRTTPTPVQMPDLIDTGDQDDLVTQSSTQESSEQIMWNSNYASSVDDL
LGGETIGNTSATSNGNGSDLFADVSFHEEEIKETNDLFSGMTVEEKSSAPVHDNSLIEQD
IFGSSPEPLFQERVDDKGTVNDLMAGLNLNGTTQAQPGLKAETNGNLNGSQFFDMNSQNS
HVASGAALNGILGQSSFNQQVPMQYTLSPQMFGQSFAGQQLNYGAMEALLAQQQHLLQNL
GNFNAGLGHPAFNSMSGGNASGMPDIFNSSNQPPHQVAVMSNSKKDETKAFDFVSDHLAA
ARGSKK
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcaagtgccttcccctctccgccgcttcctccccctctcccaaaccctagct
ccggccccgctcctctacctctcgcgccgcctcttcttctcttccgtctccgctccccgc
tcccccttcacccgtgccgccggcatccgccccctcgtgtatcgctgccaggccagccgc
catcacccccgccgtgggaacagcacggccaggaaggaacccgaggggatggctagcggt
ggcggtggcggtggcaaagacgcgggggtggcgttcaataagatgcgtgcggaggggagg
gacgtcaggaaggacaggagcatggagctcaagaaccgcagggccaaccccatcagcaca
acctcctacgtgcagatactcggtacaggaatggacactcaagataccgctccttcaatt
ttactattctttgacaaacaaagatttatatttaatgctggcgagggtcttcagcgtttc
tgcactgaacacaagataaagttgtcaaagattgaccacatctttttcactcgcgtgtgc
tcagaaactgcagggggccttccaggtctcgtgctaactcttgctgggatgggagatgag
ggcatgtcggtgaacatatggggcccttcggaccttgattttctagcaggcgcgatgaaa
tcttttatcccaaatagggcaatgcttcatacacacagctttggtgtggaacacagtgca
tcttcttcacaatctacagaagctactgttattattgatgatgaagtagttcgtatatca
gcaatgtttgtcaaaccgaggtacaacaatgaagccaggaattcaacagatatcaactca
aagcctggtgatactgctatagtctactcatgtgaattggcagaaattaaaggaaaattt
gaccctgataaagctcaggcccttggtcttgagcgtgggccaaagtatcgtgaacttcaa
cttgggaactctgtgaagactgaagctggtagaatggttcatccaagtgaggttctcgac
ccaccaattcctggaccaatcgtacttctagtggattgccctacacaatatcacatgcat
gaactgtttttgctgcaatcacttagccgcttttatgaagattcttcctgccaaacagag
aatgccaagaaagtaaattgcataatccacttaggtccatcttctgtgacaaatactgtt
gattatcagaactggatgaaatcttttggcaccacacagcatatcatggcagggcatgaa
aataaaaacatggaagttcctatcctgaaaggtagtgcaaggatatcttcacgtcttaat
tttgtatgccctcagctcttcccatcctctgggttttggcctgtggaacctgcaaatggt
attgatttggagaagaataagagtacttcattccaagcctgtgaaagtgtgacagcagca
aacttgctgaagtttcgtctgcgtccatatgctcaactggggttggatagagcttctatt
ccaagcttgtttagttatgaagaaattgtagatgaacttatttctgagattcctgagatt
aaagaagttcctgagcagattagcaagttctggcaaagtagtgtagaccaaaaaaatgca
ttggcaccagctgggaaacatatgctgatggttgaagagccatggattagtaaagactcc
tgtcttcctgatattttagatgaacaggagaattcagctaagtttcaagatgacagtagt
ttgagagaaagtgtttggagaaagcgcccaaagggcaattcagagaccccctgctgcgtg
gagaatgctacgagagaagatatggaaattacgtttttgggtacgggttcttcccagcct
tcaaaatatcgaaatgttagttccatatatattaacctgtttgcacgaggaggtatgctt
cttgattgtggtgaaggaacgttaggacagctgaaaaggaggtttggtgtaagtggtgct
gatgaagctgtaaaaaacttgaggtgcatctggatttcccatattcacgctgatcaccac
acgggtctcgctagagttcttgccttgaggtcaaaattgctaaacggtgttcctcacaaa
cccttgctcgtgattggaccaaaacaactcctgagatttctaaatgcatattcaacactt
gaagatcttgatatgcagttcctagactgcagacaaactttgaagcctagtgttgaggaa
cttcttggtgataatgccaccgaatcggcaacaactcaacttgaaaataccatgtttgcc
cctggaagcagaatggagaactacaacaagaagccttcaagtccgaaggatactacagct
ctcgctaatttgaaagaagttctacatgaatcaggtttggagattctgtacagtgtccct
gtcgtacattgtgcacaggcgtttggagttgttttgagagccaaggagaaggtgagtagt
gctgggaaggcaattccaggatggaaggttgtatattcaggcgacacgcggccgtgccca
gctcttgtagatgcgtccagagatgccaccgtgctgatacatgaggcgacgtttgaggac
agcatgaaggacgaagcgatcgcgcggaaccacagcacaacgaaggaagccatagcagta
ggcacatcggctggagcgtaccgcataatcctgacccactttagccagagatatcctaaa
atcccggtctttgacgaggatgacatgcacaagacctgcatcgctttcgacctcatgagc
gtaaacctcgccgatttgcccgtgctaccaaaggtcctgcctcacctgaagctcctcttc
aaggatgagatggtcgtcgaagagtctgatgaggctttgcggttgattaaatatgctgtt
ggaaaatctggcacggatttcaagcgggaaatgcaacgacactcagcggctatgcgtcag
cttgttcattacaaaggacaccctgaccccttaaaaggggatgcccttaataaggctgtc
cgcgaaactgcaaacgaggccattgctgctattttctccactgaggaccctaaagcagtt
gttgtgacagaaggtctaggcaagcgcatacagggctttggaaacactaattatgagcca
tcaagagatgacaagaagtctttcctcagcgaactaagtgaagtagtgggcattggtggt
gcttccattaaacagggtttgagcaactttgctgccacacattcaatgatgccaaatgat
aatggtggtatgtacaagaacccaattcgcaggtctctgaccacagaaactgatagatat
ggcaggtacgatccaagtgaaattcaaggtgagagccgtgctacatctggtgcttcaaag
aatgtgagttctggttcttggggtccaagtccctcaagttcagcatcagccggtgatact
gaatcaagtcaaccaggaattaagactcgtgaggagagacttttggaaacaattgttact
gcaagcggtgtgcggttgcaacccactcgagatgctctgcagatatttttaacagaagcc
tccaaactggatgcagttgctttgagccgtgcccttgagagcaaactgaactctccattg
tggcaggttcgcatgaaggctatctgtgtactggaagcggttgtaaggaaacaggatact
gatccttattccattgttgcttcatatttcagtgagaacagtgcttctgttgtcagatgt
tgtgaactgccacaagtttctctcagagaaaaggcttcaaaagtattaaatctgctggtt
ggggaacaacctaccggaagcaaacatctttcagaatcaagaactacacccactcctgtt
cagatgcctgatttgattgatacaggggatcaggatgatctagtaactcagagttcaact
caagaaagcagcgagcagataatgtggaacagtaattatgcttcttcagttgatgatttg
cttggtggtgaaactattggtaataccagtgccactagcaatggtaatggaagtgatctg
tttgcagatgtatcattccatgaggaagagattaaggagactaatgacctattctcaggc
atgacagtagaggaaaaatcctcagcccccgtgcatgataactctctgatcgagcaagat
atatttggcagcagcccggagccattgttccaagaaagagttgatgacaaaggaactgtc
aatgatttaatggctggtttgaaccttaatggcactacccaagctcagcctggactaaaa
gcagaaactaacggtaatctcaatggttcacagttctttgacatgaacagtcagaatagc
catgtggcaagtggtgcagcactaaatggtatccttggtcaaagctccttcaatcaacag
gttcctatgcagtacaccttgtcaccacaaatgtttggtcaatcatttgctgggcagcaa
ttaaactatggtgctatggaagctcttcttgctcagcagcagcacttactacagaacttg
ggaaatttcaatgctggacttgggcatcctgctttcaattcaatgagtggcggaaatgca
tctgggatgccagatattttcaattcaagtaatcaacctccacatcaagtagctgtgatg
agcaattctaagaaagatgaaactaaagcttttgattttgtctcggatcaccttgcagca
gctcgtggttcaaagaagtag
DBGET
integrated database retrieval system
