Triticum dicoccoides (wild emmer wheat): 119267712
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Entry
119267712 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119267712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119267712
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119267712
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119267712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119267712
NCBI-ProteinID:
XP_037405040
LinkDB
All DBs
Position
3A:complement(163607856..163610698)
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AA seq
327 aa
AA seq
DB search
MDVDSVECLSLPDAAMDADDVGLALHPHGGLLAAAAASRPAAYPKAAAAAGGIVAPGSSV
HELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESL
ELPCKHYSLGCPEIFPYYSKIKHEAMCSFRPYSCPYAGSECSVTGDIPYLVNHLRDDHKV
DMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
DENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLLIQRNMALFFSGGDRK
ELKLRITGRIWKETQTPDGACVPVLCS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacagcgtcgagtgcctctcgctgcccgacgccgccatggacgcggacgac
gtcggcctcgccctccacccgcacggcgggctcctcgccgccgccgccgcctcccgcccg
gccgcctaccccaaggccgccgccgccgcggggggcatcgtcgcgccggggagcagcgtg
cacgagctgctcgagtgccccgtctgcaccaactccatgtacccgccgatccaccagtgc
caaaatggacatactctgtgttccacatgcaaagctagggtacacaatcgttgccctact
tgccgacaagagctcggtgatatcaggtgtttggcactggagaaagtagccgaatcgctt
gagcttccctgtaagcactattccttgggttgcccagagatcttcccatactacagcaag
ataaagcatgaagcgatgtgcagctttagaccatacagttgcccctacgctggttctgag
tgttctgtgactggtgatattccttaccttgttaaccatttgagggatgaccacaaagtt
gatatgcacagcggttgcacattcaaccatagatacgtcaaatccaacccaagagaagtc
gaaaatgccacctggatgctaacggtgtttcactgtttcgggcagtacttctgcctgcac
tttgaggccttccagcttgggatggcaccagtgtacatggccttcctgcgtttcatgggg
gacgagaatgaggcgcggaactacagttacagccttgaggtcggcgccaatggcaggaag
atggtatgggagggcacccccaggagcgtccgggacagccaccggaaggtgcgtgacagc
cacgatggtctcctaatccagaggaacatggcattgttcttctcgggcggcgaccggaag
gagctgaagctaaggatcaccggccggatctggaaggagacgcagaccccggatggtgcc
tgcgtaccagttctctgtagctaa
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