Triticum dicoccoides (wild emmer wheat): 119267834
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Entry
119267834 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119267834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119267834
03036 Chromosome and associated proteins [BR:
tdc03036
]
119267834
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119267834
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119267834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
119267834
NCBI-ProteinID:
XP_037405167
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All DBs
Position
3A:complement(195366148..195373325)
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AA seq
909 aa
AA seq
DB search
MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTTTNNPFGSPTTAFGAQTGTTSPFGA
TSSTAGAFGQPSAPAFGATSTPAFGAAPTGGFGQPSTPAFGTPSSSPFGSSTPAFGASPA
PAFGAGATSSGFGSGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGNSTFGATTTPA
FGTTTTPSFGATTTPAFGSTSTSLFGASSTPAFGSTPFGSTTTPGFGSSGTTTFGASSAP
AFGASSTPANAFSFGSSPSFGQTASAAGSTPFGTTPSPFGAQTSPFGSQTAAPAFGQASF
GNQSGGTRVQPYVQTPDPDSATSGTQPAAKLNSISAMPAYKEKSHEELRWEDYQRGDKGG
PNSSVTPVANSFPTPSPSFQTNPPANPFAKPSTGGFGATPNPFSSPTVTPFGQTSSSAFS
ANTSPSLFANTTPSLFSTPSTTPNLFNNSLSISNNTQSAGLFQSSPAIAPFSQSFSQQSS
TPAFSTGIFNTPNPGMTGGLFGNTSSPFLTSTFQQSAPVQQTPSLFSFQPQTQPASTGGF
TGFSNTMNLAPFGQQTTSQSNMVMQPTLVSNPFGTLPAMPQMSIGNGGSAPSIQYGISSL
PVAEKPLPSRTVSMVVPRHLSQRRIKLLPRKYNQTSDGKVPFFADDEESPATPKADAFFI
PRENPRSLIIRPTDQWRSRSAADRQSVLRDSTDLDKHNDALVGKERGKAVVSPARSGSVE
NGTYRDDHHQALPEAHANGSSVKKLIPKLSQADYFTEPSLEELAAKERAEPGYCSRVRDF
VVGRQGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKDDNEKPPVGEGLNKAAVVTLLN
IKCVNRKTGETYTEGPRVDKYKEMLVKKAEEQGVEFISFDAAKGEWKFKVKHFSSYGFAE
AEVGLVDSL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaatccgttcgggcagtcgtccgccagcgcttttgggcagacctcc
agcaaccccttcggggcccaatcggggttcggccagaccagcaccaccaccaacaatccc
ttcggcagcccgaccaccgctttcggggcgcagaccgggaccacctcgcctttcggcgcc
acatcttccaccgccggcgcgtttggccagccatccgctccggcgttcggggctacatcc
accccggcgtttggggccgcgccaaccggcggatttggccagccatccacgccggcgttc
ggcaccccgtcgtcctctccattcgggagctccacaccagcctttggtgcgtcgccagcc
cccgcgtttggcgcgggcgccacatcctccggctttggcagcggatctttgtttggacaa
aagccaagttttggtggttttggatcatctcctagccagtctagtcctttcggtagcaca
tttcagcaaacacagccaacatttggcaacagcactttcggcgccacaactacaccggcc
tttggcaccacgacaacgccatcctttggtgccacgaccaccccagcgtttggctcaaca
tcaacatccctatttggggcttccagcacaccagcatttggctccacacccttcggttca
accacgactcctggttttggatcctcaggaaccacaacatttggtgcgagcagtgctcca
gcttttggagcttcaagcacgccagcaaatgcttttagttttggttcttccccatccttt
ggacaaacagcatctgcagccggaagcactccgttcggaacaactccttcgccttttggg
gcacaaacttctccatttggctcgcagacagcagcaccagcatttgggcaagcttcattt
ggaaatcaatctggaggaaccagagtacagccttatgtgcagacaccagatcctgacagt
gctacaagtggtactcagcctgctgcaaaacttaattccatatcagccatgcctgcatac
aaagagaagagtcatgaagagttgaggtgggaggattaccagcgtggagacaaaggtgga
ccaaactcttctgtaactccagttgcgaacagctttccaactccgtcgccaagttttcaa
acaaatccgccggcaaatccatttgctaagccctctacaggtggttttggtgccactccg
aacccattttcgtcgcccacagttaccccatttggacaaacaagcagttcggcattttca
gcaaatacctcaccatctctatttgcgaatactactccttcattattcagcacgccatcg
acaaccccaaatcttttcaataatagcttatccattagtaataatactcaatcagctggg
ctgtttcagtcttcccctgcaatagcgccatttagccagtcgtttagccagcaatcaagc
accccagctttctccactggtatattcaacacaccgaaccctggaatgaccggagggctg
tttggcaacacatcttcaccttttctaacatcaacatttcaacaatctgctcctgttcag
cagactccaagcttattctcattccaacctcaaacccaaccagcttctacaggtggattc
actggtttttccaacacgatgaatctggctccatttggacagcaaaccaccagccagtcc
aatatggttatgcagccgactcttgtttcaaatcccttcgggacacttccagcaatgcct
cagatgtccattgggaatggtggatccgcaccctctatccagtatggcatatcaagtttg
ccggttgctgagaagcctcttccaagcagaacagtatccatggtggttcctaggcatttg
tcgcagagaaggataaaactgctgccacgaaaatataatcagacatctgatggaaaggtt
ccgttttttgccgatgatgaagaatctcctgcaacaccaaaagcggatgccttttttatc
cctagagagaacccgaggagtctgataatccgtccaactgaccagtggcgttcacgtagt
gctgctgacaggcaatcagtactgagagattcaactgatcttgacaaacataacgatgct
ttggttgggaaggagcgcggcaaggctgttgtgtcaccggctcggtctggttcagtggaa
aatggcacctaccgtgatgaccaccaccaggcattacctgaggcgcatgcgaatggttct
tctgttaagaagctcatacctaagctatcccaggcagattacttcacggagcctagttta
gaggagcttgccgccaaagaacgtgctgaaccaggctactgcagtcgggtgagagacttt
gttgttggacgtcaaggctatggcagcatcaaattcttgggagaaactgatgtaaggggc
cttgatctggaatcgattgtggaattcaataaccgtgaggtgattgtgtacaaggacgat
aacgaaaagcccccggttggtgagggcctgaacaaagctgccgtggtgactcttttgaac
atcaagtgtgttaacaggaagacaggcgagacgtacacggagggtccaagggtagacaag
tacaaggagatgctggtgaaaaaggctgaggagcagggcgtggagttcatctcgtttgac
gctgcaaagggtgagtggaagttcaaggtgaagcacttcagctcctatggttttgctgaa
gctgaagtaggcctggtcgattccctgtag
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