KEGG   Triticum dicoccoides (wild emmer wheat): 119267921
Entry
119267921         CDS       T07278                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119267921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119267921
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119267921
Spliceosome [BR:tdc03041]
 Complex B
  Other components
   Prp19 complex
    119267921
 Complex C
   Prp19-CDC5 complex
    119267921
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119267921
SSDB
Motif
Pfam: BCAS2 Arc_MA HAUS6_N
Other DBs
NCBI-GeneID: 119267921
NCBI-ProteinID: XP_037405278
LinkDB
Position
3A:218646714..218651440
AA seq 256 aa
MASSATREVLMLEAPPSEAAGVPWRPPPDAETVDALPYIDGDYGDPAVKREVDRLVEEEM
RRAHRKPADFLRDLPPVPIIGFENHPMLAKEYERVRAGKPPATIEMSRYGLEPPPANKRN
DVVAWRQALRNAQSQLQHQIVRIENLELMLKHGVEVWKLQNRKMESVLSRTQKMTLEYNE
KIETVNRERKFHQQNTGGQLHALTVEWQELCQKNMAIQAACVDLQNQIDLLKLEAKEQGM
PMAGSNETNPQASVGI
NT seq 771 nt   +upstreamnt  +downstreamnt
atggcctcgtcggcgacgagggaggtgcttatgctggaggcgccaccgtccgaggctgcg
ggtgtgccttggcgcccgcctccggacgctgagacggtggacgcgctgccctacatcgac
ggggactacggcgacccggcggtgaagcgcgaggttgaccgcctcgtcgaggaggagatg
cgccgcgctcaccgcaagcccgccgacttcctccgtgacttgccccccgttcccatcatt
ggattcgagaatcatcctatgcttgcgaaagagtacgaacgtgttagagctggcaagcca
cctgctaccatagagatgtcccgctatggtttggagccacccccagcgaacaagaggaat
gatgttgttgcttggaggcaggctttacggaatgcccagagccagctgcagcatcaaatt
gtgcggattgagaatctggagcttatgctgaagcacggtgttgaggtttggaagctccag
aacagaaagatggaatcagttttgtctaggacacaaaaaatgactctggaatacaatgaa
aagatagaaactgtcaaccgtgagaggaaatttcatcagcaaaacactggtggacaactc
catgccttgacagtagaatggcaggaactgtgtcagaaaaacatggctattcaagctgcc
tgtgttgatctacagaatcaaattgatctgcttaaacttgaagctaaagaacagggaatg
ccaatggctggtagcaatgaaactaacccacaagcatcagtagggatttga

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