KEGG   Triticum dicoccoides (wild emmer wheat): 119268110
Entry
119268110         CDS       T07278                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119268110
Spliceosome [BR:tdc03041]
 Complex B
  Other components
   Complex B specific factors
    119268110
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st LisH_TPL WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SPT8 DUF7165 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd VPS8_N Beta-prop_IFT122_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 119268110
NCBI-ProteinID: XP_037405514
LinkDB
Position
3A:complement(306917623..306941718)
AA seq 517 aa
MASSTSTLEIEARDVVKIMLQFCKENSLHQTFQTLQNECQVSLNTVDSMDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEEPERYL
RLEHLLVRTYFDPNEAYQESTKEKRRAQIAQAIASEVSVVPPARLMALITQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEEAYPTTLSHQIKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYVSGKLKKDLQYQADESFMMHEDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTG
QCLRRLERSHAKGVTSVTFSRDGTQILSTSFDTTARIHGLKSGKMLKEFRGHDSYVNYAI
FSTDGTRVITASSDCTVKVWDAKTADCLQSFKPPPPLRGGDASVNSVHLFPKNSDHIVVC
NKTSSIYIMTLQGQVVKSFSSGKREGGDFVAASVSPKGEWIYCVGEDMNMYCFSQQSGKL
EHLMKAHDKDVIGITHHPHRNLVATYAEDCMMKIWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcttcgacgtccaccctagagatcgaggctcgcgacgtggtgaagataatgctg
cagttctgcaaggaaaactcgcttcatcagacgttccagaccctgcagaacgagtgccag
gtctcgctcaacacggtggacagcatggacaccttcattgccgacattaatgctgggcgc
tgggatgccgtgctgccgcaggttgcccagctgaagctgccgcgcaagaagctcgaggac
ctctacgagcagattgtgctggagatggcagagctccgtgagcttgacacggcccgtgca
atccttcgccagacacaggtgatgggggtcatgaaacaggaggaacccgaacgatacctc
cgactagagcacctccttgtccggacatactttgacccgaatgaggcttaccaagaatct
accaaggaaaagcgacgtgcgcagattgcccaagcaattgcttctgaagtttcagtagtc
ccaccagctcggctaatggcactgattacccaggctttgaaatggcaacagcaccaaggt
ttgttaccccctggcacacagtttgatttgttcagaggaaccgctgcaatgaagcaagac
gaagaagaggcatatcctactactttgtcacatcaaataaagttcgggaagaaaacccac
cctgagtgtgctcgattctcacccgatggccagtacctcgtttcatgctcagtggatgga
atcattgaagtctgggattatgtcagcggcaagctgaaaaaggatcttcaatatcaagcc
gatgaaagctttatgatgcatgaggatgctgtgctctgtgttgattttagtagagattct
gagatgctggcatctggatcacaggatggaaaaattaaggtttggcgtatacgaactggc
cagtgcttgcgacgcctcgagcgttcacacgcgaaaggtgttacaagtgttacattctca
cgtgatggaactcagatactgagtacctcttttgacactactgcaagaatccatggcctt
aagtccgggaagatgctaaaagaatttcgcggtcatgactcctacgtgaactatgccatc
ttttctactgatggcacccgtgttatcacagcttccagtgactgtactgttaaggtatgg
gatgcgaaaacagcagactgtttgcaatcattcaagcctcctcctcctctgaggggagga
gatgcatctgttaactctgtccatttgtttccaaagaatagtgatcacattgttgtctgc
aataagacttcgtcaatatacatcatgactttacaaggacaggttgtaaagagcttctca
tctggtaaacgggaaggaggagattttgttgcagcttctgtttcaccaaaaggagaatgg
atatattgtgttggtgaagacatgaacatgtattgctttagccaacagtccggtaaactt
gagcatctaatgaaggcccatgacaaggatgtgattggcattactcaccaccctcacagg
aacttggttgccacctatgccgaagattgtatgatgaagatatggaagccttaa

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