Triticum dicoccoides (wild emmer wheat): 119268162
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Entry
119268162 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119268162
KO
K24155
rabconnectin-3a
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119268162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119268162
Membrane trafficking [BR:
tdc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119268162
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119268162
RAVE complex
119268162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_VPS8
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
119268162
NCBI-ProteinID:
XP_037405592
LinkDB
All DBs
Position
3A:complement(346413205..346438223)
Genome browser
AA seq
2451 aa
AA seq
DB search
MREHDPLPQLPLALHPPHLIPPAPTPDHRALSFLPDFGGLPWVAYAAGSLLVVSHLPSPP
RTSVSDTVEDESPFFCQVIDLHTPVSAVAWCGRGRGELAAASGNSVSVFQPAPSSGSFSW
LLRWVITEMFTVTAIAWTGSGDGIVVVGGGVAMWARVQSSWQLAWRSTPQVPQSLVSATH
FVHAPVVAASAAAPVEGNVPVLVFLNDAKLGLETAELLHPQPVSMIQWRPLTLSVGDPSE
VRREILMTCCLDGTARLWTGAEVTRSKKQPTSRRSFSVIAVIELDNILNGVLGVDISVRW
AVETGSVVSRDEEAKFKLFSGHSWQNKVGKCEWLVSVGPGRCTNFWAAHCLDDVSPPRYP
RITLWKQSEPQAWEESAINPKSTVQPIFVETVISRSICSGPPTRCSLLHLLPDNSFIWSR
LAFGLSSDSGSHVSSDSSKSISCCSTKTINQVGHKGSIIEVSVHPYSCEIELAVSMDSSR
MLFVWSLSTLSTLISTLHAPTYPSWKLLCKFDLHDISSDAQYSCLCWAPSVFHDNRFLVL
GGENGADLVVVRIPNGGVVSCHKMFTVPFLGGSNAEEPPDSIHTIPLASNCNKSFLNNSF
LIVCVWRKSFQVLSWKVVLHSENHHEGRGCLCEFSANSLSTADQGRHVTYVHGEMFAAAI
YEGSTVFPTVVDGEYPTCISVMSLDNTVLPLQQHVPFATSPGYHIATGYSDGTVKLWKMS
GADNPLQTGRWSNSWELVGMFGAHPGPISAISLSRCGRVATVGRNVQKNNTSIHIWEAVK
LMGDGCFLLEDALMIQSAVVGLDWLSLGNGRFLLAVCFRNKLHIYSHKHPSFQNVLHTAN
LEEKHLWSCIALAHSHHDVASFCWGPKASIALVHNNHLSLFSSWLVRGANERITQKGVCS
ATDVHDKLPCTVHVNETIFGKSGLSENYSNAEATENNSTLLPGQHNSHCSNGLWSLLDIS
SNLSGPLAPYHPRALIHHLYSGEWKRADGILQHLVESMKASTTLNTLLDCSSCSKSCHNI
PELPLSRYFTHTPSSDISSKGLLWGENGSSTAFNLLSPSNSFSYMTSNLGINTTTSASER
SEISQLLDKNFGMFAISDTEKIQIHTVSDLLGEITDQNRASPYKTLDEAGRRFWIAVQFQ
RLYVLRRSGDSSSAEGCHLDSASIAWAFQSDCQDDLLDYVLPAESTWLEMQNLGMGLWYT
NVSQLRIRMEKLARLQYLKSKDPKDCALLYIALNRIKVLVGLFKVSRNEKDKRLYEFLCR
NFQEEKNKAAALKNAYVLLGRHQWELAIAFFLLGGDTSSAINVCAKNLQDEQLAMVVCRL
VEGSGGPLERNLISNVLLPDAVEKGDHWLSSLLEWMLGNYSQSVSKLFGCHPKLLFDESD
THGGQNVFADPELGQYCAILSTKNSFRNCAGEALSAKLSKLSFALAACALNRCGLPLEAL
ECLSSKSSIVEKDGTSSQHGADDKILDGILNPFNASSNWLSSSVVNDVESELKVTMASNY
LSRMLRNHFLCAHCGLPLAKDKVLKEHNSHGIEELAHDFSAAISIFHKRFSLQFYDVAEK
ILTSCSHDGLLFLAHVLLSVCRSPDGGTNSHCLEGCASRSIDYLLLVSCKESFKFLTRYV
VSCCFICSVLNTDLTNITACTPLENMKYIIATLSHYQSTSRLLLKHDLSRTSALDKTSAI
STVIDLLDYNIGFSVSWLCHDIKALLIMSNPVLGASANDESCQVLLDRLMQAAHHKSHGI
SINTEAVMPNGSLDKRQPGGSEDSSLSIDEKWHLIGASLWIGLSSFMKHHLKEFIGNEKL
ECEACTSDVKEFKGLASSVAAKFVIDSLQFVSSSLVRLHASFFREKLSNNLHPSVLFWLE
YMSSQPRSNKTSRDQLTYIAQGTNTENMEVLFHVLWEISANSLDICAAFVNEDVNCFPLN
NTKLSRSWKNMVESTKVECENDSTQSNGGENKCSVSSKDNEKGRGFVDKASSDVETSLEP
KRKCLIEEKGFQSPKELLRRNGELLEAICLNSTNEQHAAIATNRKGLVFFNWYGNQQDKK
SAEYIWSGSEWPSDGWACSETTPAATLISPSVGPGRRRGSHLGSDGANIGVGSLVKPGRD
LTGGGAFGIPGYAGIGASGFGWGEPDEFEDFVDPPATLENIHSRALSRHPSLPLLLVGSS
NTHVYLWEFGKDSARATYGVLPAANIPPPYALASISAVQFDYYGQRFATAALDGTICTWQ
VEVGGRSNVHPTESSLCFNSHASDVAYVDASGSVLTAAGCNSNGANVVILDMLAPPATCQ
TSIVCHEGGARSLTVFDNNIGCGSISPLIVTGGKSGDVALHDFRFVSTGKSKHHKTSAGG
SSRGMIWHIPKAHLGSVTSLSTIPDTTLFLTGSKDGDVKLWDAKNSQLVFHWPKLHERHT
FFQPTSRGFGGVVKAAVTDIHVLTNGFVSCGGDGSVKLVQIKNEFATVHQD
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcacgacccgctgccgcagctcccgctcgccctccatccaccgcatctgatc
cctccggcgcccacccccgaccaccgcgctctctcgttccttcccgacttcggcggcctc
ccctgggtcgcctacgccgcgggctccctcctcgtcgtctcccacctcccctcccctccc
cgtaccagcgtaagcgacaccgtggaagacgaatccccattcttctgccaagtcatcgac
ctccacacccccgtgtccgcagtcgcctggtgcggccgcgggagaggcgagctcgcagcc
gcgtccggcaactccgtctccgttttccagcccgcaccttcctcaggttcattcagttgg
ctcctgagatgggtcatcaccgagatgttcacggtcaccgccatcgcctggacgggttcc
ggcgacggcatcgtggtggtcggtggtggcgttgccatgtgggccagggtgcaatcctcc
tggcagcttgcttggaggtccacaccacaggtgccgcagtccctcgtctctgctacccac
ttcgtccacgcccctgtcgtggcggcgtcagctgctgctcctgtggagggcaatgtgcct
gtcctggtatttctgaatgatgccaaattgggtctggagactgctgagcttctgcatcct
cagcctgtttccatgatccagtggaggcctttgacgttatctgtcggtgatccatctgaa
gtgaggagagagatcctcatgacctgctgcttggatggaactgctcggctatggactggg
gctgaggtgaccaggtcgaagaagcagcctacttcccgaagatctttcagcgtcattgca
gtgattgagttggacaacattctaaatggagtgcttggagttgacatatctgtgagatgg
gcagtagaaactggcagtgttgtatcacgagatgaagaagctaagttcaagttgttttca
ggtcattcctggcagaacaaggttggcaaatgtgagtggctggtcagtgttggccctggg
cgttgtaccaatttttgggctgctcattgtcttgatgatgtatctccaccaaggtaccct
cggattacactatggaagcagagcgaaccacaggcttgggaggaatctgctattaaccca
aaatctacagtacaaccaatttttgttgagactgtaatatcacgaagtatatgttctggc
ccacccacaagatgctctttgcttcatttgctgcctgataattcattcatttggtctcgc
ctggcttttggattatcatcagattctgggagtcatgtttcaagcgattcttctaagagc
atctcatgctgttcaaccaagactattaatcaagttggacataagggtagtatcatagag
gtgtctgtccatccatatagctgcgagatagagctagctgtttctatggattctagcaga
atgctatttgtatggtctctttcaaccttatcaactctcatatcgaccttgcatgcaccc
acttatccttcatggaagctcctgtgcaaatttgatctgcatgacatttcttcagatgcg
caatattcatgtctttgttgggctccttcagttttccatgataacaggtttcttgtcctg
ggaggtgaaaatggagctgatttagttgtcgtcagaattccaaatggaggtgttgtttca
tgtcacaagatgttcacagttcctttccttggagggagcaatgcagaagaaccacctgat
agcattcataccatacctttagcttctaactgtaacaagtcatttttaaacaacagtttc
ctaattgtgtgcgtatggaggaagagctttcaagttttatcatggaaagtagtcctgcat
tcagaaaatcatcatgaaggaagggggtgtttatgtgaattttctgccaactcactttcc
actgcagatcaagggagacatgttacttacgtccatggtgaaatgtttgcagctgctatt
tatgaaggttctacggttttccctactgtcgtggatggagaatatcccacctgcatttcg
gttatgtctctggacaatactgtattacctctacaacagcatgtaccttttgcaacttcc
ccaggttatcatattgctactgggtactctgatggcactgtgaaactttggaagatgtct
ggtgcagataaccctttgcagactgggagatggagcaacagctgggagctagttggcatg
tttggtgctcatccaggaccaattagtgcaatttcactatccagatgtggtagagttgct
actgttggcagaaatgttcagaagaataatacatccattcatatctgggaagcagtaaaa
ctcatgggagatgggtgttttctcctggaagatgcactaatgattcaaagcgctgttgtt
ggtttagattggctatctttaggcaatggtagatttttacttgcggtctgttttcgtaat
aagttgcatatatattcccataagcatccttcctttcaaaatgtgctgcacactgcaaat
ttggaagagaagcatctttggagttgtattgcattagctcattctcatcatgatgttgcc
agcttctgctgggggccaaaggcgtcaatagcgcttgttcataacaatcatctttcactg
ttcagttcatggttagtaagaggagcaaatgaacgtattacccagaaaggcgtttgttct
gccacagatgtgcatgataagttgccatgtactgtgcatgttaatgaaactatctttggt
aaatctgggctatctgaaaattacagcaacgcggaggccactgagaacaatagcacgctg
ttaccaggccaacacaatagtcattgttctaatggtttgtggagcttgttggatatatct
agtaatctgagtggacctttggcgccatatcacccaagagcacttatccatcatctttat
tcaggtgaatggaaacgtgcagatggcattctgcagcatcttgttgaatccatgaaagca
agtacaacattaaacaccttgttggactgtagttcatgcagtaaatcatgccataatatc
cctgaacttcctttgtcgcggtactttacgcatacaccgtcaagcgatatttctagcaaa
gggttactgtggggtgagaacggaagtagcacagccttcaacttgctgtcaccatcaaat
tcattttcttacatgacgagtaatttaggtatcaataccaccactagtgcatctgaaagg
tcagagataagtcagctccttgataagaactttggcatgtttgcaataagtgacactgaa
aaaatacagatacatacagtttctgatcttttgggtgaaattactgatcagaaccgtgct
tctccctataaaacccttgatgaagcagggcgaaggttctggattgctgtgcagttccaa
cgcctatatgtgcttaggagatctggagattcatctagtgctgaagggtgccatcttgat
tctgcttccattgcatgggccttccaatctgattgtcaggatgatctacttgattatgtt
cttccagcagaatcaacttggttagagatgcaaaaccttggtatgggattatggtatacg
aatgtgtcccagctaaggatcaggatggagaagttggcaaggttgcagtatcttaaaagc
aaggatcccaaggattgtgctctgctctatatagcattaaacagaataaaagtattagtt
ggccttttcaaggtcagcagaaatgagaaggataaacgtctgtatgagtttctctgcagg
aacttccaggaagaaaaaaacaaagccgctgcccttaaaaatgcttatgtactactggga
aggcatcaatgggagcttgctatagcatttttcctgcttggaggtgatacttcctctgcc
atcaatgtttgtgcgaagaaccttcaagatgaacagcttgctatggtagtttgtcggctt
gttgagggatctggagggcccttggagcgtaacctcatttcaaatgtgctgctccctgat
gcagttgagaaaggagaccactggctttcaagcctgcttgaatggatgctagggaactac
tcccagtctgtcagtaaattatttggctgccatcccaagttactgtttgatgaatccgac
actcatggtggtcagaatgtgtttgcagacccagaattgggtcagtattgtgcaatccta
tcaacgaaaaatagtttcagaaactgtgctggtgaagctctatctgcaaaattatctaag
ctttcatttgcactggctgcatgtgccttaaacagatgtggactacctcttgaagcactt
gaatgcctatctagtaaatcaagcatagttgagaaggacggcaccagctcacaacatggt
gcagatgacaagattcttgatggaatactaaaccctttcaatgcttcttccaattggctt
tcatcatctgtcgttaatgatgttgaatcagaactcaaagtaaccatggcttcaaattat
ttgtcacgcatgctgagaaatcactttctctgtgcacattgcggcctaccattagctaaa
gataaggtccttaaagagcacaatagccatggcatcgaggaacttgcgcatgattttagt
gctgcaatatccatatttcataaaaggttctcacttcagttttatgatgtagctgagaag
atccttacctcctgttcccatgatggtttattatttcttgcacatgttctgctatcagtt
tgtagatcaccagatggtggaactaatagtcattgtcttgaaggttgcgcttcccgttcg
attgactatctgttgttggtgtcatgcaaggagagttttaaatttcttactcgatatgtt
gtctcctgctgcttcatctgttctgttcttaatacagacctcaccaatattactgcatgt
acacctttggaaaacatgaaatacattatagcaactttatcacattatcagagtactagc
aggctactcctgaaacatgacctcagtagaacttctgcattggacaagacatcagccata
tctactgttattgatctccttgattacaacataggcttttctgtttcttggctatgccat
gacataaaggcattacttatcatgagcaatccagtgttaggtgcttctgcgaatgatgag
tcatgtcaagtattattagaccgattgatgcaagctgcacaccataaaagtcatggtata
tcaattaacacagaggcggtaatgcccaatggttcattggacaagagacaaccaggagga
agcgaggattcaagtctttcaattgatgaaaagtggcatttgataggtgcttccttgtgg
attggattgtcatcctttatgaaacatcacttaaaagagttcattggaaacgagaaactt
gaatgtgaagcttgtacaagtgacgtgaaggaatttaagggtcttgcctcttcagttgct
gcaaagtttgttattgattccctgcaatttgtgtcgtcttcattagtaagactccatgca
tcatttttcagagagaaattatcaaataatttacatccgagtgtgcttttctggttagaa
tatatgtcgtctcagccaaggtccaacaagactagccgtgatcagctcacatatatagct
cagggcacaaacactgagaacatggaggtgttgtttcatgttttgtgggaaatatctgct
aactctctggatatatgtgcagcatttgtgaatgaagacgtgaattgctttccgttaaac
aacacaaagctcagtagatcttggaagaatatggttgaaagtacaaaagtcgagtgtgaa
aacgattctactcaaagtaatggaggagaaaataaatgcagtgttagctccaaggacaat
gagaaagggcgtggatttgttgacaaggcttcttctgatgtggaaacctctcttgaacct
aaaaggaaatgcctgatcgaagaaaaaggctttcaaagcccaaaggaacttctaaggaga
aatggggaacttcttgaggcaatatgtctcaactcaaccaatgagcaacatgctgctatt
gctaccaaccgaaagggtcttgtttttttcaactggtatggtaatcaacaggacaagaaa
tcagcagagtatatttggtcaggatctgagtggccatcagatggttgggcttgttctgaa
actacacctgctgcaactcttatttcacctagtgttggtcctggcagaagaagaggatct
catcttggctcagatggggcaaatattggggtaggttctttggtgaaacccggaagagac
ttaactgggggtggagcatttggaattccaggttatgctggtattggggcatcagggttt
gggtggggcgaacccgatgaatttgaggattttgttgatcctccagcaacccttgagaat
atccattcaagagcactatcacgccatccctctttgccattgttgctagtggggtcaagc
aatacacatgtgtatttatgggagtttggtaaagatagtgcaagagctacatatggtgtt
ctccctgctgctaatattccaccaccttatgcacttgcttccatatcggctgttcaattt
gattattatgggcagcggtttgcaactgctgcattagatggtacaatttgtacatggcaa
gttgaggtgggtggaagaagcaatgtccatcctacagagtcatccttgtgctttaacagc
catgcttctgatgttgcgtatgtggatgcaagcggatctgttcttactgcagctggatgc
aattcaaatggcgcaaatgttgttatcttggatatgctagctccaccagccacttgtcaa
acttctattgtgtgtcatgaaggaggagcccgttctcttactgtgttcgacaacaacata
ggctgtggatccatctcaccgctgattgtaactggtgggaaaagtggagatgtggcattg
catgatttccggttcgtttctactggaaagagtaagcatcacaaaacttctgctgggggt
agctcccgtgggatgatttggcatataccgaaggctcatttagggagtgtcaccagtcta
tcgaccattccagataccaccttattcttgactggaagcaaagatggagatgtaaagctt
tgggatgctaaaaattcccagctagtctttcattggccgaagttgcatgagcggcacact
ttttttcaaccaacctccaggggctttggtggtgttgttaaggctgctgtaacagatatc
catgtcttgactaatggtttcgtttcgtgtggtggcgatggttctgtgaagcttgtgcag
ataaagaatgagtttgccacagtacatcaggactag
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integrated database retrieval system
