Triticum dicoccoides (wild emmer wheat): 119268296
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Entry
119268296 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119268296 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119268296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119268296
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119268296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
Motif
Other DBs
NCBI-GeneID:
119268296
NCBI-ProteinID:
XP_037405781
LinkDB
All DBs
Position
3A:393958558..393988722
Genome browser
AA seq
2457 aa
AA seq
DB search
MAASEREAGLLARVAANHLFLAQFEPMRAALLSLRRRSDPDLAADFLRAVVASGGRVPGV
LWSALPACPSSSHLAWLVALELAALPSTPNPESLRLKAEFLILLQPIADDPATGVDARGT
LVKLLDLGVARLKREVDGYGEPVEEVPVTEEDLRGLWGVVLDNAELFDALCAGVSRQIGL
DSGFGVNVLLWLRRSVQLAHLDAMKALVMAGDVESATGHIRFLCLENGVEEDSYKVVLGD
VVKKGWEKSSNYFGKWFESRNRIIKIYGEALQSSSPQLVQLIQIILDDILSEEFEDHSIS
DAHWMPLPFKKFLETLWLERDADSDDRTILTEAIVSCKKDLFHYSRLSGKHVLEVIMETA
LSLIKREQLQEAVNVVSLFPLLQPLVAVLGWDILKGKTELRRKLMQLFWTSKSQALRLQE
YSHYRAQTDETSCEEYLCDLLCFHLDLASFVSSVNSGHPWNLRNSLLFSQQEQDSVVNAE
TLDPFVENMILERLAVQTPMRVLFDVVPGIKFQDAIELVGMQPLSSTTAASKRMHDIELM
HMRYALQSVALSLGEMEKCAGDGNEHHYHIALSYLKEMQNFMEAIESTPRKIFMVSIVLS
LLHMDDTIKLPQAAPPECSVNHDYCDSNTESEGKNMVISFVGLLLDILRHNVLFKGPDMD
QLPSTGLSPAGRQALEWRLKHASHSIEDMDWRLSVLQRLPPLSGRQWSWKEALVVLRAAP
SKLLNVCMQRANYGIGEEAVQRFSLPAEDKASLELAEWVAGAYRRALVEDALNRATDNPN
VARESDILSFRAQLGPLTTILLCIDVAATSARSGDMCRFLLDEATSLLSEIFPGTSPKIG
PTYWDQIQEVAIILVIKRILQRLSGILDLEGRPYLQVVFTEVSASLSTESSRVGQKQRPL
GLLHQMIDDAFRGKRQFLNGNAYFIQLNCNCCCDYVLEAFLNFSISGKLHNVARAIVDED
SDKTYSKDGTKSEKKDALISEKGTVLGHGLRILKQASKTDPTASSVPESSSDHKGSTNRY
LGHVSTKPSTYLSNFIIYIATIGDIVDGTDTTHDFNYFSLVYERPKDLLTRLVFEHGSTD
AAAKVADTMGVDFVHEIISACVPPVLPPRTGQGWACIPILTTVSNIISENSSTVPKSLPP
DQGWSPHDSLLSSRRDPLYPLQLNLVKHLAQLSSVRAVLACVFGSSILSGDSESSPTYVK
DAMQTTEVERSFYEFALEQSERYPTLNRWIQMQSNLHRVSESAVAVKTENEVAVHQSKGK
ISIKRAREPDSDAESELEDVVINGNAASSTLESPKYDDAKLEPTAFISFDWENEGPYEKA
VERLINEGKLTDALAVSDRCLRNGASDKLLRLLIDQREERSLGTGQFRPYGSRNLGSNTW
QYCLRLRDKKLAAQLALQYLHSWNLDAATNVLTMCICHLPENDPMRSKVLHMKQSLQRYG
HIMSADDHYTRWQEVEVDCEDDPEGLALRLAAKGAVSAALQVAESASLSIDLRRELQGRQ
LVNLLTTDPLNGGGPAAASRFLSTLRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTV
GNLSDAEIARLNSWALGLRVLSLLPLPSQQRCSSLHEHPQLILEVLLMMKQLESASLVLK
EFPSLRDDKLIIAYAKKAISVNIDSTLREPRQTISAAREKQKKAAIPAKTNFVQSFGNFQ
REARKAFSWVPRDGGTKTPPKDIPRKRKSSGSGDRSSWEAMPGVQEEQTPVYPSEGQDRL
PFVSAPEEWVLTGESDRDNTTRSCHRYESSPDIALFKALLSLCTDESVAGKGALELCVTQ
MKVVLSSLQLPLNASMDNVARAYHATETYVQAISYAKNLLKKLTGSSDLSSGSERSRDAD
AVSVDAGSSSTGVQHQDELSDLLAQADMWLGRAELLQSLLGSGIIASLDDIAGKESSTSL
RDRLVSDERYSMAVYTSKKCKIDAFPVWVAWGHALVRMEHYAQARVKFKQALQQFKGDAP
PVVLDIINTIEGGPPVDVSSVRSMYEHVAKSAATIFDDSLSADSYLNVLYMPSTFPRSER
SRQSRDSLDNQFSSASSYLEDGPRSNLDSVRYAECIHYLQEYARPQMLAFMFRHGHYAEA
CSLFFPSSEPTAEGETSLSSVPRSDPLTTDYGTIDDLCDLCLGYGAMSVLEDTILAITQS
TTYHDTTVIQYMNTVLTRICNYCEMHRHYNYLYNFLVLKGDHVASGLCCIQLFMNSMSQE
ESLKHLGHAKTHFEEALSVRDRTIEATKLVSRTARNKSASEKLTREMIMKFSTRVSYQMD
VVKALNSVDGPQWKTSLFGNPTDPETLRRRCMVVETLAEKHFDLAFRMLHEFDLPVVDVY
AGVAASLAERKKGGQLTEFLKNIRGTIEDDEWDQVLGAAINVYANKHKERPDRLIDMLIS
NHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagcgggaggccggcctcctcgcccgcgtggccgcgaaccacctcttc
ctcgctcaattcgagcccatgcgcgcggctctactcagcctccgccgccgcagcgatccc
gatctcgctgcagacttcctccgcgcggtggtcgcctcggggggccgcgtccctggcgtg
ctctggtcggcgctgcccgcctgcccctcctcctcccacctcgcctggctcgtcgcgctt
gagctcgctgccctcccttccactcccaaccccgagtcgctccgcctcaaggctgagttt
ctcattcttctccagcccatagctgatgaccctgccaccggcgtcgatgctcggggaacg
ctcgtgaagctgctggatttgggggtggcgaggctgaaacgcgaggtcgacggctatggg
gaacctgtcgaggaggtcccggtcaccgaggaggatctgagggggttgtggggggtcgtc
ctcgacaatgccgagctgtttgacgccctgtgtgcgggcgtttcgaggcagatcggactg
gactcgggttttggtgtaaatgtgctcctgtggttgcgacgtagcgtgcagctcgcccac
ttggatgccatgaaggcgcttgtcatggctggtgacgtcgaaagtgctactgggcatata
cggttcctctgtttggagaatggcgtagaggaggacagttataaggttgtcctaggtgat
gttgtgaaaaagggttgggaaaaatcatcaaattattttggaaaatggtttgaatcgcgt
aatagaatcattaaaatttatggagaagcacttcagtcaagcagtccccagcttgttcaa
ctaattcagatcattctggatgacattctttctgaagaatttgaagaccacagtatctct
gatgctcattggatgcctcttcctttcaagaagtttctggaaacattgtggttggagagg
gatgctgattcagatgacaggaccattttgaccgaagctatagtatcctgcaagaaagat
ctattccactattctcgactttctggaaagcatgtccttgaagttatcatggaaactgct
ctatcattaattaagagagaacagcttcaagaagctgttaatgttgtttctttatttccc
cttcttcagccattagttgctgtattgggttgggatattctgaagggtaagacagaactg
cggagaaagttaatgcagttgttctggacaagcaaatcccaagctctgcgtctacaagaa
tattcacattaccgtgcacagacggacgagacatcctgtgaggagtacctatgtgacctg
ttgtgctttcatctggatcttgcatccttcgtttccagtgtgaattctgggcacccttgg
aatttgaggaattcattgttgttctcccaacaagagcaagattcagttgttaatgcagaa
acattagacccttttgttgagaacatgatacttgagcggttagctgttcagactcccatg
agagtgctgtttgacgtggtcccaggaataaagtttcaagatgcaattgagcttgttggt
atgcagccactttcttcaacaactgcagcttcgaaaaggatgcatgacatcgagctgatg
cacatgcgatatgctctacagtcagttgccctttctttaggggagatggagaagtgtgca
ggtgatgggaatgagcaccattatcacatagctttgtcatatttgaaggagatgcaaaat
tttatggaggctatcgaaagcactccacgaaagattttcatggtcagcattgtattatca
ttattacatatggacgacactatcaagttgccgcaagctgcccccccagagtgttctgtc
aatcatgattattgtgatagtaatactgaatctgaagggaagaacatggtgatatctttt
gttggacttctgcttgacatacttcgacataatgtcctatttaaaggccctgatatggac
cagttgccaagtactggtctgtcacctgctggcaggcaagcattagagtggagactcaaa
catgccagccattccattgaagacatggattggcgtctatctgttctacaacgcctccca
cctctgtctggacgacaatggagttggaaggaggcattagtcgttttacgtgccgctcct
tccaaattgttgaacgtgtgcatgcaaagggcaaattatggtataggagaggaagctgta
caacgattttctttgcctgctgaggataaagcttctcttgaattagccgaatgggtagct
ggtgcatacagaagagcattggttgaggatgctctaaatcgggccacagacaacccaaat
gttgcacgcgaatcagatattttgtcattccgtgctcagcttggtcctttaactacgatt
ctgctttgcattgatgttgctgcaacttctgctaggtcaggggatatgtgtagatttctt
ctcgatgaggctacaagtttgttatctgaaatatttccaggaacctccccaaaaataggt
ccaacttattgggatcagattcaagaagttgctatcatattagtgataaagcgcatcctt
cagcgcctgagtggcattttagatctggaaggtcgtccatatcttcaagtagtctttacc
gaagtgagtgcctctttgtcaactgaatctagcagagttggacaaaagcaacgtccactt
ggactcctgcatcagatgattgatgatgccttcagaggaaagcgtcagttcttgaatggt
aatgcctactttattcagttgaactgtaattgttgttgcgattatgttctagaggcattt
ctgaacttttctatttcaggtaaacttcacaatgttgcaagagctattgttgatgaagat
tcggataaaacttactcgaaagacggtaccaagtcagaaaaaaaagatgctttgatatct
gaaaaaggtacagtccttggtcatggacttagaatcctgaagcaagcatctaagactgac
ccaacagcttcaagtgttcctgaaagcagttcagaccacaaaggttctacaaacagatac
ttgggtcatgtatctaccaagccgtcgacatacttatcaaacttcataatatatattgca
accattggtgacatagttgatggaactgacacgactcatgatttcaactacttctcattg
gtgtacgaacgaccaaaagatcttttaactcgtttagtttttgagcatggaagcactgac
gcagctgcgaaggtagctgacacaatgggtgtggattttgtgcatgagataatatcagct
tgtgtgccaccagttcttcctccacgaacaggacaaggatgggcttgcattcctatttta
accacagtttccaatattatttctgaaaacagttcaacagttccaaagtccctcccccct
gatcaaggatggagtccacatgattcattgttgtcttctcgccgggatccgctgtatcct
cttcagttaaatttagtgaagcatttagcccaattatcatcagtaagagcagttctggca
tgtgtgtttggaagtagcatactatctggtgacagtgaatcatctcctacttatgtgaag
gatgcaatgcaaaccactgaagttgagaggtcattctatgaattcgctcttgaacaatca
gagagatatccaactttgaaccggtggatacagatgcagtctaaccttcaccgggtatct
gagtctgccgtggcagttaaaactgaaaatgaagtcgccgtgcatcaatcaaaaggaaaa
atttctattaagcgagctcgtgaacctgacagtgatgctgaatcagagcttgaagatgtc
gtcataaatggaaatgccgcttcaagtacactagaatcccctaaatatgatgatgctaaa
ctagagccaacagcatttatttcttttgactgggagaacgaaggaccatatgagaaagcc
gttgagaggctaattaatgaaggaaaactaactgatgctcttgctgtatccgaccgttgt
ttgcgcaatggagcgtctgataaattacttcgattgctcattgatcaaagggaagaaaga
agtctaggcacaggacaattccgcccatatggttcccgtaacttggggagcaatacttgg
cagtattgtttgagactgagggataaaaaacttgcagctcagcttgctcttcagtacctg
cacagttggaaccttgacgctgcaaccaatgttctaactatgtgcatctgccacttacct
gagaatgatcctatgcggagtaaggtgctacacatgaagcaatctctgcagcggtatggt
catattatgagtgctgatgaccattacaccagatggcaagaggtcgaagttgattgtgaa
gatgatccagaggggttagcactcaggcttgccgccaaaggagctgtatctgctgcttta
caggtcgccgaaagtgcctctctgtcaattgatttgcggagggaactgcaaggccgccag
cttgtcaatcttcttaccactgatccacttaatggtggaggcccagctgcggcatcacga
tttctatcgaccttacgagattccaatgatgctcttcctgttgccattggtgccatgaag
ttattacctgacttgcgctcaaagcagcttctcgtgcatttttttctcaaacgtacagtt
gggaatttgtcagatgctgagattgctcgacttaattcatgggcgctgggtcttcgtgtt
ctttccttattgccattgccatcacaacagcgttgctcttctctgcatgaacatcctcag
ttgattctggaagtactattgatgatgaagcaactcgagtctgcatctctggttttgaaa
gaatttccatccctgagggatgacaagttaatcattgcttacgctaagaaagcaatctct
gtcaatattgattctactcttagggaacctcgacaaaccatctctgcggcaagagaaaaa
caaaaaaaggctgccataccagctaaaacaaattttgtgcagagttttggcaactttcag
agagaggcacgtaaagcattctcatgggtgccccgcgacggtggcaccaaaacccccccg
aaagatatccctcggaaaagaaagagttcaggctcaggtgatagatcctcttgggaagcg
atgcctggtgtacaggaggagcagacacctgtttacccttccgaaggacaagatagactt
ccttttgtttctgctcctgaggagtgggtgcttaccggagagtctgatagggataacaca
actcgttcatgtcatagatatgaatcctctccagatatcgcactattcaaggcattgctt
tcactgtgcaccgatgagtcagtagccggaaaaggtgcacttgaactatgtgttactcag
atgaaggttgtactaagctccctacagttgcctctcaatgcatctatggacaatgttgcc
cgggcttatcatgcaacggaaacttatgtgcaggcaatctcttatgcaaaaaatctacta
aaaaagctcaccgggagtagtgatttgtcaagtggctctgaaagaagtagagatgctgat
gctgtttctgtggacgctggcagttcaagcactggggtccaacatcaagatgagctgtct
gatctccttgctcaagcagatatgtggctagggcgtgctgagcttcttcaaagcctgctg
ggatcaggtattattgcatcacttgatgatattgctggcaaagagtcttcaactagtcta
cgtgacaggctggtcagtgatgagcgatacagcatggctgtatatacttctaagaagtgc
aagattgatgcttttccagtgtgggttgcttggggccatgctctagttcgaatggaacac
tacgctcaagcccgtgtgaaatttaagcaagctcttcaacagttcaaaggtgatgcgcct
cctgttgtccttgatatcattaacacaattgaaggaggtcctcctgttgatgtttcttct
gtccgctctatgtatgaacatgtagcaaaaagtgcagcaaccatcttcgatgattccctt
tctgctgattcttatcttaatgttctatatatgccatccacattcccacgatctgagagg
tccaggcaatccagagattctctagataaccaattttcgtctgctagctcataccttgaa
gatggtcctcgcagcaatcttgatagcgtccgatatgcagagtgtattcattacttgcag
gaatatgctcgcccacaaatgctggctttcatgttcaggcatggccattatgcagaagca
tgctctctattctttccatccagtgaaccaaccgcagaaggggaaacatctttgtcttca
gttcctcggagtgatcctttaacaactgattatgggacaattgatgacctgtgtgatcta
tgtcttggatatggtgctatgtctgtattggaggatacaatattagcaataactcaatcc
acgacatatcatgacacaactgtgattcagtacatgaacactgttctcacccgcatttgt
aactactgtgaaatgcatcggcactataattatctttacaattttctggttctaaaaggt
gaccatgtggcttctggcctttgctgtattcagttattcatgaattcaatgtcccaagag
gaatctctgaagcatttgggacatgccaagacacattttgaggaagccttatctgtacga
gatagaacaattgaggctacaaaattggtatcacggactgctcgcaataagagtgcatcg
gaaaaactaactcgagagatgataatgaaattttctaccagagtttcctatcagatggat
gttgtgaaggccctcaacagtgtagatgggcctcagtggaagacctccctgtttggaaat
ccaactgatcctgaaactctgaggcgaaggtgcatggttgttgaaactctggctgaaaaa
cattttgatttagcttttagaatgcttcatgagtttgatcttccagttgtggatgtttat
gccggtgtagcagcatccctcgcagagaggaaaaaaggtggccagttaacggagttcttg
aaaaacattagaggaaccatagaagatgatgaatgggatcaggttctgggtgctgctata
aatgtttatgctaacaagcataaagaaaggccagatcgacttattgacatgctaatcagc
aatcacaggaaagtacttgcttgcgttgtttgcggccgtctaaaaagtgcattccagata
gcctcacgaagtggaagtgtagctgatgttcaatatgttgcccatcaggcattacatgca
aatgcattgccggttcttgatatgtgcaagcaatggctggcccagtacatgtaa
DBGET
integrated database retrieval system
