Triticum dicoccoides (wild emmer wheat): 119268316
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Entry
119268316 CDS
T07278
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
tdc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119268316
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119268316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119268316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119268316
03036 Chromosome and associated proteins [BR:
tdc03036
]
119268316
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119268316
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119268316
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119268316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
119268316
NCBI-ProteinID:
XP_037405803
LinkDB
All DBs
Position
3A:400440358..400446974
Genome browser
AA seq
503 aa
AA seq
DB search
MNGAAAPEPTEAPAPSPQVPLDWRFSQVFGERGAGEDVQDVDIISAIEFNKSGHHLATGD
RGGRVVLFERTDAKDHVSRKDAEKADYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIKWCQETNGASFLLSTNDKTIKFWKVQEKKVKKICEMNMNPSNAPANGSPAGSTMCGS
SARTPNGGILKPGGLPLLRLPVVVTSQETSLAANCRRVYAHAHDYHINSISNNSDGETFI
SADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPSHCNTLAYSSSKGSIRL
VDLRQSALCDTHSKLFEQHEAPGSRSFFTEIIASISDIKFSMDGRHILSRDYMTLKLWDV
NMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSYSNIFRVFNCGA
GGSEVTTLEATRNPTRRQIQNPARPARSLGSLTRVVRRGAENTGIDANGNSYDLSTKLLH
LAWHPSENLIACAAANSLYMYYA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggcagcggcgcccgagcccacggaggccccggccccgtccccccaggtgccg
ctcgactggaggttctcgcaggtctttggcgagcgtggcgccggcgaggacgtccaggat
gttgacatcatctcggcaatagagttcaataaatcaggacatcatcttgccactggagac
agaggtggccgagttgttttgtttgaaaggacagatgccaaagatcacgtctctagaaaa
gatgctgagaaagccgattattctatcagcaggcatccagaatttcgttacaaaactgag
tttcaaagccatgaaccagagtttgattaccttaaaagcttggaaattgaagagaagatt
aacaagataaagtggtgccaagaaacgaatggcgcatcgtttctcctgtccacaaatgac
aaaacgatcaagttttggaaggtccaagaaaagaaggttaaaaaaatatgtgagatgaat
atgaacccttcaaatgctcctgcaaatggtagccctgctggcagtactatgtgtggttca
agcgcacgtactccaaatggtggaattttgaagcctggtggacttcctttacttcgcctg
cctgtggtagtaacaagccaggaaacaagtctcgctgcaaattgccgtagagtctatgct
catgcacatgactaccatatcaattccatttcaaataacagtgatggtgagacatttata
tcagcagatgatttgcggataaatctttggaatttggaaattagcaatcaaagtttcaac
attgttgacgttaaaccaacgaacatggaggatctcaccgaggttataacatctgcggag
ttccacccttctcactgtaatacactggcatatagtagctcaaagggctccattcgactc
gttgacctgcggcaatcagctctttgtgatactcactccaaactctttgagcagcatgag
gccccaggttcaagatccttttttactgagattatagcctcaatttctgacataaagttc
tccatggatgggagacatattctgagtcgtgactacatgactttgaagctatgggatgtt
aatatggattctggtccagttgcaacgttccaggttcacgagtacctaaggcctaagtta
tgtgatttatatgaaaatgactcgatttttgacaaatttgaatgttgtcaaagtggtgat
gggttgcgagtagcaactggttcttacagcaatattttccgagtgttcaattgtggtgct
ggtggcagcgaggtgacaacgcttgaagcaactcgaaaccccacaagaaggcagattcag
aatcccgcacggcctgcaagatctctaggtagtctgacaagggttgttagacgaggtgca
gagaacaccggaatagatgcgaacgggaactcctacgacttaagcacaaaactgctccat
ttggcatggcacccgtccgaaaatttaattgcctgtgctgcagccaacagcttgtacatg
tactatgcgtaa
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