Triticum dicoccoides (wild emmer wheat): 119268627
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Entry
119268627 CDS
T07278
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119268627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119268627
03012 Translation factors [BR:
tdc03012
]
119268627
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119268627
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119268627
Translation factors [BR:
tdc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119268627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
BEX
AAA_19
ABC_tran
Rad17
NACHT
Motif
Other DBs
NCBI-GeneID:
119268627
NCBI-ProteinID:
XP_037406195
LinkDB
All DBs
Position
1A:complement(272861251..272877691)
Genome browser
AA seq
1029 aa
AA seq
DB search
MLLHSSGCRGSLLFRSGFPFPATTTRRNLRALTTAAATPNMYRGGRGGGTNSQRGRGRGR
GGGGRGGRGGGGGGRGEQRWWDPQWRAERLRQMASEVEKVDEHEWWNTIGQLREGSQQEL
VVKKNFGRDGQNTLAHIAQRHGLYFNAYNKGKTLVFSKVPLPDYRADLDERHGSSQNEIK
MSNETERRVENLLSRAQSNNNASASTSTVSMRQSLPSTSTAVAESTTYVDKQKLSFQLRD
MQRSKKMMPSARSMQSFREKLPAFKAREEFLKAVAANQVLVISGETGCGKTTQLPQFILE
EEIDNLRGADCSIICTQPRRISAISVAARVGSERGEELGETVGYQIRLESKRSTQTRLLF
CTTGVLLRKLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATI
NAELFSKYFGDAPIMHIPGFTFPVAELFLEDILEKTQYKIKSEHDNFQGNSRKKRLASVK
NDPLADVFQDVDINKEYGNYSITTRQSLEAWSVTELDLSLVEGTIEYICRHEGEGAILVF
LTGWDEISKLLDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDRAPANMRKIVLATNI
AESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYR
LYPKVIHDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKSLQPPDPLSVKNAIEL
LKTIGALDDLEELTYLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVL
PIDRKEEADAVKRSFAGDSCSDHIALLKAFEAWKEAKRSGRERSFCWENFLSPMTLKMMD
DMRNQFFDLLSDIGFVSKTRGVKAYNHYGKDLEMVSAVLCAGLYPNVIQCKRRGKRTAFY
TKDVGKVDIHPSSVNAGVQQFPLPYLVYSEKVKTASIYVRDSTNISDYALLLFGGSLSPS
NTGEGIEMLAGYLHFSAPKRIIELIQRLRGELDKLLQRKIEEPALDIFSEGKGVVAAAIE
LLHSQNIYH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccactcttccggttgccgcggcagtctcctgttccgcagcggcttccccttc
ccggccaccaccacccgcagaaacctaagggcgctcacaaccgcagcagctactcccaac
atgtatcgcggcgggcgcggcggcggcaccaactcccagcgtggtcgcgggcgcgggcgc
ggcggcggaggcagaggaggccgtggcggcggcggcgggggccgtggtgagcagagatgg
tgggatccgcagtggcgcgccgagcggctgcggcagatggcctcagaggtggaaaaggtt
gatgagcatgagtggtggaatacgattgggcaattaagagaaggatctcagcaggagtta
gtagtcaagaagaatttcggacgtgatggacagaatacacttgcacatattgctcagaga
cacggcctttacttcaatgcatacaacaaagggaagacacttgtttttagcaaagtgcca
ctgcctgattaccgagcagatcttgatgagaggcatggatcatcacaaaacgagattaag
atgtccaatgagacagagagacgagtggaaaaccttttatccagggcacagtcaaataac
aatgcttctgctagcacatccactgtctcaatgaggcaatctttgcccagcacatccacg
gcagtagctgaatcaacaacatatgttgataaacagaagctaagttttcagcttagagat
atgcagagatcaaaaaagatgatgccaagtgctagatcaatgcagtctttcagggaaaaa
ttaccagcattcaaagcgagagaggagtttttgaaagcagtagcagctaatcaggttttg
gtcatatctggtgagacaggttgtggtaaaacaacacagcttccgcagttcatactagaa
gaggagatagataaccttcgtggtgctgattgcagtataatatgtactcaaccccgccgt
atatctgccatatcggttgcagcacgtgtaggatctgagagaggtgaagagcttggtgag
actgttggataccagattcgccttgaatcaaaacgttccacacaaacacgactgctcttc
tgcacgacaggagttttgcttagaaaactggttcaggagccagacttagttggtgtaagt
catttactagttgacgaaattcatgaacgtggcatgaatgaagattttctcatcatcatt
ttacgcgaccttctgccaaggcgtcctgaccttcgtcttgtattgatgagtgcaacaata
aatgctgaactattttccaaatactttggagatgccccaattatgcatattccgggtttc
acttttcctgttgccgagttatttctggaagatattttggaaaagacccaatacaaaatc
aagtctgaacatgataattttcaaggaaattcaagaaaaaagagacttgcttcagttaag
aatgatccattggctgatgttttccaggatgtcgacattaataaggagtacggaaactat
agcattacaacaaggcagtcccttgaagcttggtctgtcactgaactggatttgagcctt
gtggaaggtacgattgagtatatctgtcgtcatgaaggagaaggtgcaatccttgtattc
cttactggttgggacgaaatttcaaaacttttggacaagattaaagggaataatctgctt
ggcaattccaataagttcctagttctcccactgcatggctctatgccaactgttaatcag
cgtgaaatttttgacagagcaccagctaatatgagaaaaattgttctggcgacaaatatt
gcagaaagcagtattacaatagatgatgttgtgtatgtaattgattgtggtaaagcgaag
gagacaagttatgatgccttgaataagctagcatgccttctaccatcgtggatatcaaaa
gcctctgctcatcagaggcgaggccgtgcaggccgtgttcagccaggtgtttgctatagg
ttgtacccgaaagtcattcatgatgccatgcctcagtttcagctgcctgaaattcttagg
actccactgcaagaactgtgccttactatcaaaagcttacagcttggagcagtcgcttct
ttcttagccaagtcactgcaacccccagatccgctttctgttaagaatgcaattgagctt
ctgaaaaccattggagcgctggatgacttggaggagctcacttatttaggacgacatcta
tgtacactaccactggatccaaacattggaaagatgctgctcattggatccgtcttccag
tgcctggatcctgcattaacaatcgctgctgctcttgcttatcgtaatccatttgtgctc
ccaatagatagaaaagaagaagcagatgctgtcaaaagatcatttgctggtgactcctgc
agtgatcacattgcccttcttaaggcatttgaagcatggaaggaagcaaaacgcagtgga
agggagcgttctttctgttgggaaaattttctgtctcctatgaccctgaagatgatggat
gacatgcgaaatcaattttttgatctactttctgatattggatttgttagcaagacaaga
ggagtgaaggcatataaccattatggcaaggatctggagatggtttccgctgttttatgt
gctgggctttacccaaatgtcatacagtgcaaaagacggggcaagaggacagcattctac
accaaagatgtcggaaaggtggacattcacccatcatcagtcaatgcaggagtgcagcaa
ttcccattgccttatctggtttacagcgagaaggtgaaaactgctagcatttatgtgagg
gactccacaaacatatcagattatgctcttctactttttggtggttccttaagtccaagt
aacaccggagaaggcatcgagatgcttgcggggtatcttcatttctctgcaccaaagcgt
atcatagagttgatccagagattaagaggtgaattggacaaactccttcagaggaagatt
gaggaacctgcacttgacatcttttcggaagggaaaggggttgtggctgcggccatagaa
ctgttgcacagtcaaaacatttaccactag
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