KEGG   Triticum dicoccoides (wild emmer wheat): 119268669
Entry
119268669         CDS       T07278                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
  KO
K10752  histone-binding protein RBBP4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03082  ATP-dependent chromatin remodeling
tdc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119268669
   03083 Polycomb repressive complex
    119268669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tdc03036]
    119268669
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     119268669
  Histone modification proteins
   HAT complexes
    HATB complex
     119268669
   HDAC complexes
    Sin3A-HDAC complex
     119268669
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     119268669
    PRC2.2
     119268669
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     119268669
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    119268669
  Chromatin remodeling factors
   NuRD complex
    119268669
   NuRF complex
    119268669
   NuRF complex (fruit fly)
    119268669
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_TEP1_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 119268669
NCBI-ProteinID: XP_037406250
LinkDB
Position
3A:complement(480243761..480251075)
AA seq 455 aa
MKERGGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEQATYKNRQRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIREL
PQNSRIIATHTDSPDVLIWDVESQPNRHAVLGAADSRPDLILRGHQENAEFALAMCPAEP
YVLSGGKDKSVVWWSIQDHISGLGDSSKSEASPGASGSKHSKTANEKDSPKVDPRGVFHG
HDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTSPAVKVEKAHGGDVHCVDWNLHDV
NYILTGSADNSVRMWDRRNLGPGGAGSPIHKFEGHKAAVLCVQWSPDKASVFGSSAEDGF
LNVWDHEKVGKKKNPNSPGGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGT
LQIWRMSDLIYRPEDEVVSELETFKSHLASCTPRA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaaggagagaggcgggtcgagggcggcggtggacgagcggtacgcgcaatggaagtcg
ctcatccccgtcctctacgactggttcgcgaaccacaacctcgtctggccatccctctcc
tgccggtggggtcctcagtttgagcaggctacctataagaatcgtcagcgcctttaccta
tcagagcagacagatggaagtgtcccgaataccctggtcattgcaaactgtgaagttgtg
aagccacgggttgcagctgcagagcacatatcacagttcaatgaggaagcacgatcacct
tttgtaaagaagtacaagactatcattcaccctggagaggttaaccgaatcagggagctt
ccacagaacagtaggatcattgcaactcatacggacagtccagatgtgcttatttgggat
gttgagtcccagccaaatagacatgctgtcctaggagctgctgattctcgccctgatttg
attttaagagggcatcaggaaaatgctgagtttgctcttgccatgtgtccagcagaaccg
tatgtgctctcaggaggaaaggacaagtctgtggtttggtggagcattcaagatcacata
tctggacttggagactcctcaaaaagtgaggcttccccaggggcatcaggcagcaagcat
agcaaaactgcaaatgaaaaggatagtcctaaagttgatcctcgaggtgtattccacggg
catgatagcactgttgaagatgtccagttctgcccttcgagtgcacaggagttctgcagc
gttggtgatgatgcttgtcttattctctgggatgcccggactggtactagcccagccgtt
aaggttgagaaagctcatggtggagatgttcattgtgtcgattggaatcttcatgatgtt
aactacatcttaactggctctgctgataactctgtccgaatgtgggatcggcgaaatctg
ggtcctggaggtgctggttctccaattcacaaattcgagggccataaagctgctgtcctt
tgtgttcagtggtctcctgacaaagcatctgttttcggaagctctgcggaagatggtttc
ttaaatgtgtgggaccatgagaaggtgggaaagaagaaaaatcctaattcacctggcggg
cttttctttcaacacgcaggtcatagggacaagatcgtagatttccactggaactcttca
gatccttggaccattgtgagtgtatctgatgatggtgagagcactggtggaggtggaact
ttgcagatatggcgtatgagtgatttgatctaccgcccagaggacgaggttgtttcagag
ctggagaccttcaagtctcacttggccagctgcactccgagggcttga

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