KEGG   Triticum dicoccoides (wild emmer wheat): 119269128
Entry
119269128         CDS       T07278                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119269128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119269128
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119269128
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     119269128
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 119269128
NCBI-ProteinID: XP_037406790
LinkDB
Position
3A:551787290..551793362
AA seq 808 aa
MPGAEADGAGGPGASSSSTADSFDAGQYAFFGKEPRDGLELGCLEADGGHGNGGGFSGPE
DGGLYRLSSVGEEIDNLSNLSDVDDLASTFAKLNRTVSGTRNPGVIGDRRSISRGSSLTV
DWTEDVEFPNYQDILENEEFQEGKRWWSSQSHSLVQQGDSKPLSRTSSYPQQPLQHRSSE
PITGPKSPPFTSFPPPGGRSPHPAQGLTRHGSIPSFGAGIQMGSPSMPLPGSPYHMVGLP
HGLPYGGSMPFGGPNMHVGNPMQNDWSNQANLFTGEHLNLLPNLLQKQISLPNSPMSSLL
FSQQQQRLAQLQPSHHQNYLNLPPHLFYHHHPPEIPGRFESATSLPSSRDKRSRSGRGKH
SLRFSQPPSDTTGSQNGESGGLKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQAC
MAKKGSSSKQKTNFSPTSVKDLPSKSRSSGDQHAYLQVDALGRVSFSSIRRPRSLLEVDN
PLSGEGPHDQKSSVRSLEKEPMLAARVTVEDAIGLLLEVDDIDRLLQSSQAQENSFQLRR
RRQVLLEGLAASLQLADPLGPSKSANSSGLAPKDDIVFLRIVSLPKGRKLLARYIRLIVP
GSELTRIVCMAIFRHLRFLFGGLPSDSSAAETTVALAKTVSTCAHHMELGALSACLAAVV
CSSEQPPLRPLGSSAGDGASLIIKSVLDRATELLTDQRAVSSYTPSNRALWQASFDAFFG
LLTKYCLTKYESILQMFVMQASGSVIGSEASQAPSREMPVELLRASLPHTNEQQRQMLLD
FAQRTTPASSFNPPGASGGHISSESVPG
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgccgggcgctgaggccgacggcgccggcggccccggcgcctcctcctcctccactgca
gatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgcgacgggctcgag
ctaggttgcttggaggctgatggtggccatggcaatggcggtggattcagcgggccagag
gatggtggcttgtaccggctctcttcggttggagaagagattgacaatctaagtaacttg
tcggacgtcgatgatcttgcgagtacttttgctaagttgaaccgaaccgttagtggaaca
cggaatcctggtgttatcggtgacagacgatccatttcaagaggaagttctttaactgtt
gattggactgaggatgtagagtttcccaattatcaagatatattagaaaatgaggaattc
caggaaggtaaaagatggtggtcatcacagtcacattctttggtgcagcaaggggacagc
aaaccgctaagtcgaacatcttcctatcctcagcagccactgcagcaccgttccagtgaa
cctatcacaggaccaaagtctcctccgtttacctcgtttccgccaccaggtggtagatca
ccacatcctgctcaaggtcttacacgtcatgggagcattccatcatttggagctgggata
cagatgggttctccgagcatgccactgccaggttccccgtatcatatggttgggttacct
catggactaccatatgggggaagcatgccctttggtggtcctaatatgcatgtaggcaat
ccaatgcaaaatgactggtcaaaccaagccaacctgttcactggggagcaccttaatcta
ctgccaaacttattacagaaacaaatatcgcttccgaatagcccaatgtcatcactgcta
ttctctcagcaacagcagagattggcacagctccaaccatcccaccatcagaattaccta
aatttaccaccccacctattctaccatcatcaccccccagagataccaggcaggtttgaa
tctgctaccagtcttccttcatcaagagacaagagatcaagatcaggaaggggaaaacac
agtttacgtttttctcaaccaccatctgatactactggtagtcagaacggtgagagtggt
ggactgaagtttagatccaagtacatgtcatctgaagagatcgagtctattctaagaatg
cagcactcggcaagtcacagcagtgatccttatgttgttgattattatcatcaagcttgc
atggcgaaaaagggttccagttctaagcaaaagaccaatttctccccaacatcagttaaa
gacttgccctccaagtctagatcaagtggtgaccagcatgcatatcttcaggtcgatgct
cttgggagagtttctttctcttccattcgcaggccccggtctcttcttgaagttgacaat
cctttgtcaggtgagggtcctcatgatcagaagtcttccgtgaggtccctggagaaagaa
cctatgctagcagccagggtcactgttgaagatgccattggtcttcttcttgaggtggat
gatattgacaggctcctgcagtctagccaggcacaggagaatagctttcagctgaggcga
aggcgacaagttctccttgaaggtctagccgcatcacttcagcttgctgaccctcttggg
cccagcaaatctgccaattcatctggtttagcccctaaggatgatattgtctttcttcgc
attgtttctcttcccaaaggacgtaagcttctggctcgttatatccggcttattgtccct
ggaagcgagttgaccaggattgtgtgcatggctattttccgacacctgaggttcttgttt
gggggtttaccatcagattcaagtgcagcagagacaacagttgctctggcaaagactgtt
tcgacttgtgctcaccatatggagcttggtgctcttagtgcttgccttgctgcagtcgtc
tgttcatctgaacaaccacctctccgtcctcttggtagctctgctggtgacggggcttct
cttattatcaagtcagtactggaccgagcaactgagttgctgactgatcagcgtgccgta
tccagctataccccgtcaaaccgagctctctggcaggcatcgtttgatgctttctttggg
cttctgacaaaatactgcctcactaagtatgaaagtattctgcagatgtttgtgatgcag
gcatcaggctctgtgattggatctgaagcctctcaagcacccagcagggagatgccagta
gagttgctacgtgcaagcctccctcacacaaacgagcagcaacggcagatgctgcttgat
ttcgctcagagaaccacgcctgccagcagttttaatccccctggtgctagcggtggacac
atctcttctgaatcggttcctggttaa

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