Triticum dicoccoides (wild emmer wheat): 119269154
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Entry
119269154 CDS
T07278
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119269154
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdc01002
]
119269154
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119269154
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119269154
Peptidases and inhibitors [BR:
tdc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119269154
Ubiquitin system [BR:
tdc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119269154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
RA
TRAF_BTBD17
Motif
Other DBs
NCBI-GeneID:
119269154
NCBI-ProteinID:
XP_037406816
LinkDB
All DBs
Position
3A:complement(554276236..554297023)
Genome browser
AA seq
1104 aa
AA seq
DB search
MTMVTPRAPEPPPQDQDEEMLVPQQEVEVFEGPQPMEESMPAVDNESLPDASTSRFTWKI
ESISKHSGRKTHSDVFVVGGYSWRVLVFPTGNNVNHLSMYLDVADAKSLPTGWSRSAQFS
LAVINQLDSKHSVRKEVTHTFNSRESDWGFTSFMPLIDLYDPSKGYIVNDQCIIEAEVAV
RKIVDYWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTVDTPSGSIP
LALQSLFYRLQHGDNSISTKELTKSFGWDSYESFMQHDVQELNRVLCEKLEDKMKGTIVE
GTIQKLFEGHHMNYIECIGVDYKSTRKESFYDLALDVKGCSDVYASFDKYVAVEMLDGDN
KYQSEKYGLQDAKKGMLFIDFPPVLQLQLKRFEYDHARDIMVKINDRYEFPLQLDLDRDD
GKYLSPEADRSVRNLYTLHSVLVHSGGVSGGHYYAFIRPTLSNQWYKFDDERVTKEDTKR
ALEEQYGGEEELPHTNPGLNMNPLKFTKYSNAYMLVYIRESDKEKIVCDLEETDINEDLK
TRLRKEDEDKENKKKEKAEAHMFTTFKVARDHDLAAQIGRDMFFDLVDYEKIHPIRVLKD
MPFNQVKEEFSKEFGIPVHSQRFWWWSKRQNNTYRPTRPLTQQEESYTVGQLKDAAIRMN
SSELRLYLEVVQENHLTLASRTKDDILLFFKLYDPEKEELRYVGNLLLKASSKPSDIVPK
LNEIAGFQPDEDIELYEEIKFEPNIMCEPVDCDVSFSLNQIADGDILCYQKRCSLDQHRH
PNVSSFFEYVHNRQVVHFRLLEKPKQDDFSLELSKRSTYDDVVEKVAQHLGMDDPSKLRL
TQHIPHLQQPKHQYIKYRSIDHLSDMLLLRNPNQMSDILYYEILDIPLPELQGLITLRVA
FHQATPNEVLFHIIRLPKGSAYSDLIDDLKSKVKLSRSDAELRLFQVNNNKIWKVYQPTE
KIDAVHDPNVPLHVEEIPEEEKSAGPRDRLVHVVHFFKDNQHIQYYGVPFFFLIREGEAL
SDIKVRIQKKFEVPDEQFLKWKFAYVAYNRPDYLQDSDIVLSRFQQKNIYGPWEQSLGLE
HSDMPTKRANQNRHSFEKPVKIYN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtgactcctcgcgcccccgagccgccgccgcaggaccaggacgaggagatg
cttgtgccacaacaggaagtggaggtcttcgagggaccgcagccaatggaagaatccatg
ccagctgttgacaatgaaagtttgcctgatgcatcaacttccagatttacatggaagatt
gaaagtatatccaagcacagtggtagaaaaactcactctgacgtttttgtggttgggggt
tacagctggcgagtgttggttttccccacaggaaacaatgtaaatcacctttcaatgtat
ctggatgttgctgatgctaagtctttacctactggctggagtaggagtgcccaatttagc
cttgctgtgatcaaccaattagacagcaagcactcagtaagaaaagaagtaacacataca
tttaattctcgagaaagtgattggggttttacgtcctttatgcctttaattgatctatat
gatcctagtaaaggttatattgtgaacgatcaatgcatcattgaagctgaggttgctgtg
cgtaaaattgtggattactggaactacgactcaaaaaaggagactggttatgttggtctc
aagaatcaaggtgccacttgttacatgaattcgctgctccagacactctaccatattccc
tactttaggaaggctgtgtaccatatgcctactgtcgatacaccttccgggagcattcct
ttagctttgcaaagtcttttctacagacttcagcatggtgacaatagtatttccacaaaa
gagctgactaaatcttttggatgggattcctatgagtcgtttatgcagcatgatgtccaa
gagttaaatcgggttctatgtgaaaagctggaggataaaatgaagggaactattgtggaa
ggaacaatacaaaaattatttgaaggtcaccatatgaattatattgagtgcattggtgtt
gactacaaatctactagaaaagagtcattctatgatctcgcacttgatgtcaagggctgc
tcagatgtttatgcatcttttgataagtatgtagctgtagagatgttggatggtgataat
aagtatcaatctgaaaaatacggcctgcaggatgccaagaaagggatgctttttattgat
ttccctccagttctgcaacttcaactgaagcggtttgaatatgatcatgcgcgggatata
atggttaagataaacgaccgttatgagttcccacttcagttggatcttgacagagatgac
gggaaatatctctctccagaagctgataggagtgtgcgcaacctctatactcttcacagt
gtgctagttcacagtggtggagttagtggtggacactactatgccttcatccgccctacc
ctttctaatcaatggtacaagttcgatgatgaacgagtgacaaaagaagacacgaaacgg
gcgttggaagagcagtatggtggcgaggaagagctcccccatactaatcctggactgaat
atgaacccacttaaatttaccaagtattcaaatgcttacatgcttgtgtacatacgtgaa
agtgacaaagagaaaattgtttgtgatttggaagagacagacatcaatgaagaccttaag
actaggctaagaaaggaagacgaagacaaggagaacaagaaaaaagagaaagctgaggct
cacatgttcactacatttaaggtggccagagatcatgatttggcagcacaaattggacga
gacatgttttttgatctcgtggattatgaaaaaattcatcctatccgtgtacttaaagac
atgccattcaaccaggttaaggaggagttctcaaaagaatttggtatccccgtccactcc
cagagattttggtggtggtctaagcggcagaacaacacctacaggcccactcggccatta
actcaacaggaggaatcatatactgttggacagcttaaagatgcagcaattcgaatgaac
agttctgaattgaggctgtacttggaggttgtacaggagaatcatttgactcttgcttcg
aggacaaaggatgatattttacttttcttcaagctctatgaccctgaaaaagaagaacta
agatatgttgggaatcttctcttgaaagcatcaagtaagccatctgatatagtgccaaaa
ttgaatgagatagcaggatttcagcctgatgaagacattgagttgtacgaggaaataaaa
tttgagccaaatattatgtgcgaaccagttgactgtgatgtttccttcagtttaaaccag
attgcagatggagacatattgtgctaccaaaaacgttgttctctggaccaacaccgacat
cccaatgtatcttctttctttgaatatgtccataatagacaggttgtgcacttcagattg
cttgaaaagccaaaacaagacgacttctctctagaactatcaaaacgttccacatatgat
gatgttgttgagaaagttgcacaacatcttggtatggatgatccttcaaaactccgcctt
actcagcacatcccgcatttacagcaaccgaaacatcaatacatcaagtatagaagtatt
gatcatctttcagatatgttacttttacgtaaccctaatcagatgtctgacattttatat
tatgaaatactggacattcctttgccagaactgcaaggtctgataacattgagagttgct
tttcaccaagctacacctaatgaggtgctgtttcacattatacgattgccaaagggtagc
gcttattctgatttgatcgacgacttaaaatcaaaggttaagctatctcgaagtgacgct
gagcttaggctatttcaggtcaacaataacaagatatggaaggtgtaccagcctactgag
aaaatagacgcagttcatgatccaaatgtacctcttcatgttgaggagattcccgaagaa
gagaaaagtgccggtccgcgagaccgtttggttcatgtcgtccacttcttcaaagataac
cagcacattcaatactatggagtgccattcttcttccttattcgtgagggcgaggctttg
tcagatatcaaagtacgcattcagaagaaatttgaggttccagacgagcagtttcttaag
tggaaattcgcttatgttgcctacaatcgcccggattacctccaagattcagatattgta
ttgagccgattccagcagaaaaacatttatggaccatgggaacaatccctaggactggag
cactcagacatgcccaccaaaagggccaatcagaatcgccattcttttgaaaagccggtg
aagatctacaactaa
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