Triticum dicoccoides (wild emmer wheat): 119269184
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Entry
119269184 CDS
T07278
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119269184
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119269184
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
119269184
NCBI-ProteinID:
XP_037406864
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Position
3A:559571270..559572498
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AA seq
378 aa
AA seq
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MALKELLMSVTLLFLLLRAATANHRHENVIDRCWRGQPNWATDRQRLAMCSVGFAGKMRQ
NSGHGVTVYTVTDPGDDPVQPKPGTLRYGATVLPGKVWITFRPGTMHIRLAQPLFVKSFT
AIDGRGADVHVAGGAGIVLYEVSNVVIHGLHVHGVRAQAPGRVVRPGGAVQTMDAGDGDA
IRLLSSSKVWIDHNTLARCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDQHVADRR
MRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNFYDGWREYAIGGSMGPTVKSQGNLFIAST
ANSANVTRRMPVGHAAGKDWHWHSSGDSFENGAVFKQTGSRVRPNYNRHQTFPAASADEV
RSLTKDAGALRCSAGAAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaagaattactcatgtccgtcaccctcctcttccttctcctccgagccgcc
accgcgaaccaccggcacgagaacgtcatcgaccggtgctggcgcggccagcctaactgg
gccactgaccggcagcggctcgccatgtgctccgtcggcttcgccgggaagatgcggcag
aacagcggccacggagtgaccgtgtacacagtcaccgacccgggcgacgaccccgtgcag
cccaagcccggcacgctgcggtacggcgcgacggtgctgccggggaaggtctggatcacc
ttccggccgggcaccatgcacatcaggctggcgcagccgctcttcgtcaagagcttcacg
gcgatcgacgggcggggcgccgatgtgcacgtcgcggggggcgccggcatcgtgctctac
gaggtgagcaacgtggtcatccacgggctccacgtgcacggcgtccgcgcgcaggccccc
gggcgtgtcgtccggcccggcggcgccgtgcagaccatggacgccggcgacggcgacgcc
atccggctgctgtccagctccaaggtgtggatcgaccacaacacgctggcgcgctgcgag
gacggcctcctggacgtgacgctcgggtccacggacgtgaccgtctccaacaactggttc
cacgaccacgacaaggtgatgctgctgggccacgacgaccagcacgtcgccgaccgccgg
atgcgggtcaccgtggcgttcaaccgcttcggccccaacgtgaaccagcgcatgccgagg
atcaggcacggctacgcccacgtcgtcaacaacttctacgacgggtggagggagtacgcc
attggagggagcatggggcccactgtcaagagccagggcaatctgttcatcgcctccacg
gcgaacagtgccaatgtgacgagaaggatgccggtcggacatgccgctgggaaggactgg
cattggcactccagtggggactcgtttgagaacggcgccgtcttcaagcagaccggcagc
agggtgcgcccgaattacaacaggcatcagacgttcccggcggcgagcgccgacgaggtg
agatcgctgaccaaggacgccggtgctctgaggtgctccgccggggccgcgtgctga
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