Triticum dicoccoides (wild emmer wheat): 119269291
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Entry
119269291 CDS
T07278
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119269291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119269291
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119269291
DNA repair and recombination proteins [BR:
tdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119269291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
119269291
NCBI-ProteinID:
XP_037406983
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All DBs
Position
3A:574719835..574723944
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AA seq
350 aa
AA seq
DB search
MPKGGGKVLNPGIVFSLFSPPVLLLRTRRRHLLTLARTAALRATSRRLFWNQAKMTSKQE
PWTRLSHSTKLPGWVAYNPRTMRPPPLSGDTKQMKILSWNVNGLRNIVQSGGFSSALAQR
ENFDVLCLQETHLKEGDVKDFMNLIPGYEYNYWSCSVARLDYSGTGVISRVKPISVQYGI
GIAEHDQEGRVITLEFENFYLVNAYVPNSGRGLRRLVYRVDSWDPSFADFVEKLESFKPV
IVCGDLNCARQSIDIHNPPAKTEDAGFTEEERESFQINFDMRGFVDTFRKQHPKAVGYTF
WGENQRRNNKGWRLDYFLASGSIIDRVHDSYILPDVTSSDHSPIGLVLKL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagggggaggaaaggtgttaaacccagggatcgtcttctccctcttctctccc
cccgtcctcctcctgcgaacccggcggcgtcatctgctaaccctcgccaggacggcggcg
ctccgtgccacttctcgccgacttttttggaatcaggcaaagatgacgagcaagcaggag
ccctggactcgactttcccacagtacgaagttaccaggatgggtcgcgtacaatccaagg
accatgaggcctccaccattgagcggcgacaccaagcaaatgaagattctatcctggaat
gtcaatgggctgagaaatattgtacagtcaggaggtttctcttctgcattggctcagagg
gagaattttgatgtgttgtgtcttcaagagacacatttgaaggagggtgatgttaaagat
ttcatgaacctgatacctgggtatgagtataattattggtcatgcagtgtcgcgaggctt
gactattcagggactggagtaatttcacgggtaaaaccaatctctgtccaatatggaatt
ggcatagctgaacatgatcaggagggcagggttattactttggagtttgagaacttttac
ttggtgaatgcttatgtcccaaattctggccgtggtttacgtagactggtttacagggtt
gatagctgggatccatctttcgccgactttgtagaaaaactggaaagtttcaagccagta
attgtttgtggtgatctcaactgtgctcgtcagagtattgacattcacaatcctccagcc
aaaactgaagatgcaggtttcacagaagaagagagggaatcattccagataaactttgat
atgagaggcttcgttgataccttcagaaagcagcatcccaaggctgtgggttacaccttc
tggggtgaaaatcagcggcgtaacaacaaaggttggcggctggattactttcttgcgtca
ggatccatcatcgacagggttcatgattcgtacatcctcccggacgtgacatccagcgac
cacagtccaattggccttgtgctcaagctctag
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