Triticum dicoccoides (wild emmer wheat): 119270011
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Entry
119270011 CDS
T07278
Name
(RefSeq) endoribonuclease Dicer homolog 3a-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119270011
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119270011
microRNA pathway
RISC loading complex
119270011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
PAZ
dsrm
SWI2_SNF2
DND1_DSRM
DSRM_2
SLFN-g3_helicase
PCDO_beta_N
Motif
Other DBs
NCBI-GeneID:
119270011
NCBI-ProteinID:
XP_037407849
LinkDB
All DBs
Position
3A:complement(658524592..658534753)
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AA seq
1679 aa
AA seq
DB search
MAEAEPESAPGGGEAGEDAMDATGPAPAPAEAEAAAPVPDVNMNPLKRPSESCAQGDEAD
GQKRQKTESQVFTPRRYQLDVFEIAKARNTIAMLDTGAGKTMIAVMLMKEFGKKIDKSNN
NGKIIFLAPTVQLVTQQCEVIKTHTDFEVELYCGASGVDHWTPQRWKEKISKSQVMVMIP
DVLLSALGKAFLSLDMVSLMIFDECHRATGKHPYSRIMKDYYHQSDHKPKVFGMTASPVI
RKGVSSNLDCEVQFTELEKLLNAKIYAVADRAEIELCAPSAKEVDRYYDPKTVCFKDLSE
ELGLLHSEYDALITTLQNKPNCQNKESDEIAKESRRRLSNSSAKILYCIDDIGLLCASEA
TKIYIERGQRKGWLKKASDATNIQSVANSSFLLAEISVLHLKFFEDMSCIIDKHLQQGSD
VLLNSESGCVEAIKTGYISPKLYELIQIFHSFSSNCDHVRCLIFVDRKITARAMERTMKK
IGHLSHFTFSSLTGGSSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIDVTDCSCV
IRFDLPKTTRSYMQSRGRARQKDSQYILMIERENVKQNNLISAILRSEKSMVETALNRDS
EDLLPGFFPVEEKNEYLVGTTGAKVTAGSSVSVIVQYCDKLPGDKYDTTKPLFEFTNHGD
GFVCTLTLPSSDMLPPLVGPKARNKKKAKQLVCLDACKQLHQLGVLTDSLCLSVEEPPLE
SVNKTDVLTSLAGVGTTKRKELHGTTRVCGLSGTWASERTAVKLQGYRMKFLCDQVGQKY
SDFVLLIDKTIAHEAANLDIDLFLHDKMVKASVSPCGLFELDVQQMEQAKLFQALLFNGL
FGKLFTGSKSSDVPREFILNKDDTFIWNNPNMYLILPMDPTVESHDITCINWRVIDEAAT
AVKLLRKIYSEEKMNIQGILDFDQNDEDLIHFANTSCETHFLRNVVVLAVHTGKIYTALH
VADLSANSTFDGVSDEKGTEFRTFAEYFEKKYGIVLRHPSQPLLVLKPSHRPHNILSSKL
RDEGNGEKKKGGTSDITKANNRVHMPPELLIPLNFSDDILRTFYLFPSLMHRIEALMLAS
QLKSEISYDDSNVSSFLILEAITTLRCSEDFSMERLELLGDSVLKYVVSCHLFLKFPNMD
EGQLTSSRVDIISNAALYGFGIEHKIQGYIRDAAFDPRRWLAPGQLSIHPVPCNCQVNSE
VVTEDINVKVGQLCDKGHRWMCSKTISDCVEAIIGAYYVEGGLRAAMAVLKWLGINVEVE
EELIGQFLSASVQTYLPKNDVIEKVEAKLGYVFLMKGLLLEALTHPSLQESAEGYSYERL
EFLGDAVLDILLTRHLFSSHKDTDEGELTDLRSASVNNENFAQLAVKHKLYQFLQHSSGK
LPENITEYVDSLENSSTDKLNLLSDAALRGPKVLGDVVESIAGAILIDRKLDLEVVWGIF
KPLLSPIVTPEKLELPPFRELLEWCNKSGYFLGIKCTDGIKRTDGDKIEATLDVQLKETL
LVRQGCGKSKKDAKAHAASMLLKDLEEEGLIVPKNASNTQQFQDHRNIFDAMDIQLSTPT
RGKRSAGSKIAASLDKPVDWPVRMSKGGPRAGLYEFCKKLQWPAPNFDCAKVEQSTPTPQ
GQGFTFASTIKLHIPNSDVISLTGDCFADKKSAMDSAALLMLYELQQRGRLQVQEIRLP
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggaaccggaatcggcgcccggaggcggagaggccggcgaggacgcgatg
gacgccaccggtcccgcgccggcgccggcggaggcggaggccgccgcccccgtccccgac
gttaacatgaaccctttgaagaggccatcggagtcgtgtgctcaaggagacgaagcagac
gggcagaagcggcagaagacggagtctcaagttttcacacccagaagataccagctcgat
gtctttgagattgccaaggcgcgaaacacgattgcaatgcttgacacaggagccgggaag
acgatgattgctgtgatgctcatgaaagagtttgggaaaaagattgacaaatcaaataac
aatgggaagatcatattccttgcaccaacagttcagctcgtcacacagcaatgtgaggtg
attaaaacccacacagattttgaggtggagctgtattgcggtgcctcgggggttgatcac
tggacgcctcagagatggaaagaaaaaatatcgaaatctcaggtcatggtgatgatacca
gatgtgttgctaagtgctttaggcaaagctttcttgagcttggacatggttagtcttatg
atatttgatgagtgccatcgtgcaactggcaaacacccttattcgagaataatgaaggac
tactatcaccaatctgaccacaagccaaaggtgtttggtatgacggcctcgcctgttata
aggaaaggtgtctcttctaatctggattgtgaagttcagttcactgaactggaaaagctt
ctaaatgctaagatctacgctgtggctgatagagcagagatagagctttgcgctccttct
gcaaaagaagtggacagatactatgacccaaaaacagtttgtttcaaggatttgagtgaa
gagttgggacttttgcattctgagtacgatgcgttaataactacattgcagaataagcct
aactgccagaataaagaatccgatgaaatagctaaagaatcacggaggcgtctatccaat
tcttcagccaaaatcctgtattgcatcgatgatattggtcttctttgtgctagtgaggcc
accaaaatctacattgaaaggggtcagagaaaaggttggctgaagaaagcttctgatgcc
acaaatattcaaagtgttgcaaatagctcgttcctgcttgcagaaatttcagtgcttcat
ctgaagttctttgaggatatgtcatgtataattgacaagcacctccagcaaggtagcgat
gtgcttctaaattctgagagtggatgtgtggaagcaattaagacgggttatatttcacca
aagctttatgaactcatccaaatcttccactctttcagcagtaactgtgatcatgtccga
tgcctcatttttgtggatcgaaagatcactgctagagccatggaacggacaatgaagaaa
attggacacctctcacattttacattttcttctcttactggagggagttcttcagtggac
gctctgacccctaaaatgcaaaaggacacactggattcatttcgctctggaaaggtgaac
ttactatttactacggatgtcgcagaagagggtattgatgtcacagactgctcgtgtgta
ataagatttgatttgccaaagactacccgtagttatatgcagtcacgtggacgagcacgc
cagaaggactctcagtacatactaatgattgaaagggaaaatgttaaacaaaataatttg
atatctgccattttgagaagcgagaagtcaatggttgagactgctttgaacagagattcc
gaggatctactccctggtttcttcccagttgaagaaaaaaatgaataccttgtaggcaca
accggagcaaaagtaactgctggttctagcgttagtgttatcgtccaatactgtgacaag
cttccaggagacaagtacgacaccacaaaacctttgtttgagttcaccaaccacggtgat
ggttttgtgtgtacgttaacactaccatctagtgacatgttgccacctttggtgggtcca
aaagcaagaaacaagaagaaagcaaaacagcttgtttgtcttgatgcatgtaagcagctg
catcagctaggagtacttactgactctctttgtctatctgttgaagagccaccactggaa
tctgtgaacaaaactgacgttctcacatctttggctggtgtaggtacaaccaaacgaaag
gagctacatggtacaactagagtatgtgggttgtctggtacctgggcatcagagagaact
gctgttaagcttcaaggctacagaatgaaatttctttgtgaccaagttggtcagaaatac
tccgattttgttctgttaattgataaaactatagcacatgaagctgctaatttggatatt
gatctgtttctacatgacaagatggtgaaagcttcagtctctccttgtggcctttttgag
ttggatgttcaacagatggagcaagcaaagctatttcaagcacttctgttcaatggtttg
tttggaaagttgttcactggatcaaaatcatccgacgttccgcgggagtttattctcaat
aaagatgacacgtttatctggaataatccaaatatgtatttgattttacctatggatcct
actgtggagtcccatgatattacatgcatcaactggagagtgattgatgaagccgcaaca
gctgttaaacttttgaggaagatttattctgaagaaaaaatgaacatacagggaatactt
gatttcgaccaaaatgatgaagatctaattcatttcgccaacacttcatgtgagactcat
ttccttagaaatgtggtagtgctggcagtccacacaggaaagatatatactgctcttcat
gttgccgatctatctgccaatagcacatttgatggtgtatcagatgaaaaaggaacagag
ttccgcacctttgcagaatactttgagaagaagtatggcatagttcttcgtcatccctca
cagccactactagtgctgaaacccagtcataggcctcacaacattctttcctcgaagctc
agagatgaaggtaacggtgagaagaaaaagggtggcacatcagatataactaaggcaaac
aaccgtgttcacatgcccccagagttgctgattccccttaatttttctgatgacatttta
agaacattttatttgttcccatctttgatgcatcgtatagaggcattaatgctagccagt
caactaaagagtgaaatttcatatgacgattctaatgtatcaagctttctgattctagaa
gctatcacaactcttcgatgctctgaagacttctcaatggagcgtctggaattattggga
gattctgtgttgaagtatgtcgttagttgtcaccttttcctaaaatttcctaacatggat
gaggggcagttaacatccagtagggttgatataatatctaatgctgcactttatgggttt
ggaattgaacacaaaatacagggttatatacgtgatgctgcatttgatcctcgtcgatgg
cttgcaccaggacagctctccattcatcctgttccttgtaattgccaagtaaattctgag
gttgtcactgaggatattaatgtgaaagtaggccagctgtgtgataagggacacagatgg
atgtgttccaaaacaatttctgattgcgtcgaagctataatcggtgcatattatgtagaa
ggtggcttaagagcagctatggctgttctcaaatggttgggaattaatgttgaagttgag
gaagaattgattggtcagttcttgagtgcatctgtgcagacttatcttccaaaaaatgat
gtaattgaaaaggttgaagcaaaactaggctatgtatttttgatgaaaggtcttctgcta
gaagctcttacccacccatcactgcaggaatcagcagaaggatattcctacgagcgtctg
gagttccttggtgatgctgtcttggatattcttttaacacgacatcttttctctagtcat
aaagacaccgatgagggggagctgacagatttacggtctgcatcagtaaacaatgaaaat
tttgcacaactcgcagtgaagcataagttatatcagtttctccagcattcttctgggaaa
ttaccagaaaatattactgaatatgtggatagtttagagaattcttccacggacaaactc
aaccttttatcagatgcggcattaagagggcctaaggttctgggtgatgttgtagaaagt
attgcgggtgcaattcttatagatagaaaacttgatttggaggtagtttggggtattttc
aaacctcttctttcccctattgttacacctgagaagctggagttacctcccttcagagag
cttctcgaatggtgcaacaaaagtgggtactttctaggaattaagtgtacagatggaatt
aagcgtacagatggagacaaaatagaggctactctggatgtgcaactcaaggagacgctc
cttgtcaggcaaggttgtggcaagagcaaaaaggatgctaaagcacatgcagcttccatg
ttactcaaggaccttgaggaggaaggacttatagtaccaaagaatgcaagcaacacgcaa
cagttccaggatcatcgtaacatttttgatgcaatggatatacaactttcaacaccaacc
aggggaaagcgatcagctggatcaaagatagctgccagtcttgataaaccagtggactgg
ccagtgagaatgagcaaaggaggaccccgtgcaggactgtatgagttctgcaaaaagtta
caatggccagctcctaatttcgattgtgcgaaggtagaacaaagcacgcctacgcctcaa
ggtcaagggttcaccttcgcgtcaaccataaaactgcacataccgaatagtgatgtgatc
agcctcacaggggattgctttgcggataagaagagcgcgatggattccgccgcactgctc
atgctctatgagcttcagcagcgagggagattgcaagtccaggagattcgtcttccctga
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integrated database retrieval system
