Triticum dicoccoides (wild emmer wheat): 119270019
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Entry
119270019 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119270019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119270019
03009 Ribosome biogenesis [BR:
tdc03009
]
119270019
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119270019
Spliceosome [BR:
tdc03041
]
Complex A
U1 snRNP components
U1 related factors
119270019
Complex B
119270019
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Helicases
119270019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119270019
NCBI-ProteinID:
XP_037407859
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All DBs
Position
3A:complement(658949704..658954693)
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AA seq
574 aa
AA seq
DB search
MNPYADNRYADPSSYRDRRSDLAAAPILAPPVPVAPAQNPYAAPYTPMAAPVGGFGQGGG
GYGGGMGYGGRGRGGGGGGPGGFRGGGGRGGSNGRDGLDSLNLPKADFRGLIPFEKSFYV
ECPAVQAMSDTEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI
QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA
VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR
RVTYLVLDEADRMLDMGFEPQIRKILAQIRPDRQTLYWSATWPREVETLARQFLQNPYKV
MIGTAELKANHSIQQIVEVISDHEKYPRLSKLLSDLMDGSRILIFFQTKKECDKVTRQLR
MDGWPALSIHGDKAQSERDYVLAEFKNGKSPIMAATDVAARGLDVKDIKCVINFDFPTTI
EDYIHRIGRTGRAGATGMAFTFFTHSNAKYSRNLVKILREAGQVVNPALEAMSKSAGSMG
GGGNFRSRGRGGFGGGGYGGNRSGSNSIPVRRRY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctacgccgacaaccgctacgccgacccctcctcctaccgcgacaggcgcagc
gaccttgccgcggcccctatactcgccccgcccgtccccgtggcccccgcccagaacccc
tacgccgcgccgtacacgcccatggccgcccccgtcggcggcttcggccagggcggcgga
ggctacggcggtggcatgggatacggcggtagaggtagaggcggcggtggcggtggacca
ggtggcttccgtggcggcggtggcagaggaggcagcaacgggagggacgggctcgactcg
ctcaacctgcccaaggcggacttccggggccttataccgttcgagaagagcttctacgtg
gagtgccccgccgtgcaggctatgtcggacacggaggtggcgcagtaccgtcagctccgg
gacatcaccgtggagggccgggaggtgcccaagcctatccgcttcttccatgaagctaac
tttccagattactgcatgcaagcaattgctaagtccggatttgtggagccaacgcctatc
caagctcagggttggccgatggccttgaagggcagggacgtgattggtattgcagaaact
ggatctgggaaaacactatcttacatactacctggtttggttcatgttggtgcacagcct
cgactagaacaaggtgatggcccgattgtcttgatccttgctccaacaagagaactggct
gtccaaatacaggcagaagctacaaaatttggatcatactcgagaactagaagcacatgt
atctatggtggagcacctaagggaccacaaatacgtgacctaaggagaggagttgaaatt
gtcattgcaacacctggccggttgatagatatgctggaagctggtcacacaaacctacgt
cgggttacataccttgtcctggatgaggcagatcgtatgctcgatatgggttttgaacct
cagattcgaaaaatattggcacaaatccgtccggacagacaaaccttgtactggagtgcc
acgtggccgagagaagttgaaacgctggctagacaatttctacaaaacccttacaaggta
atgataggaacagctgaacttaaagctaaccattccatacagcaaattgttgaagttatc
tcggatcatgaaaaatatcccaggctaagtaaacttttatctgatctgatggacgggagc
cgaatcttgatattttttcaaacaaaaaaggaatgtgataaggtcactcggcaacttaga
atggacggatggccagcattatctatacatggtgataaagctcagtctgaaagggactat
gttctggcagagtttaagaatgggaagagtcctataatggctgccacagatgtagcggca
cgtggtcttgatgtgaaggatattaagtgtgtgattaattttgatttcccgacaactatc
gaggattatattcataggataggtcgcactggccgtgccggtgctaccgggatggcattc
acgttcttcacacattccaatgcaaaatattcaaggaatctcgttaagatcttgcgcgaa
gctgggcaggttgtgaatccagcgttagaagctatgtccaagtctgctggttctatggga
ggaggaggtaatttccggtcaaggggccgaggtgggtttggtggtggtgggtatggtggt
aaccgttctggatcaaattccattccagtacgtagaagatactaa
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