Triticum dicoccoides (wild emmer wheat): 119270176
Help
Entry
119270176 CDS
T07278
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119270176
04121 Ubiquitin system [BR:
tdc04121
]
119270176
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119270176
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119270176
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119270176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
DUF7129
Zn_ribbon_6
DUF7410
zf-Nse
HypA
Rubella_Capsid
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119270176
NCBI-ProteinID:
XP_037408042
LinkDB
All DBs
Position
3A:complement(683295206..683297580)
Genome browser
AA seq
289 aa
AA seq
DB search
MSGGRQTYWCFQCRQRVRPRGREMECPYCDAGFVAEMDDVDALMSQFVGMYSDFHRDPRF
GIMEAMSTVMRHGMGSMNREADVRGRPSILSELEMEFGSGPWLLFRGQLPGHLSEANNGF
DVFVNGRRGVGMRRADVADYFVGPGLEDLIEQLTHNDRRGPPPASQSSIDAMPNVRITAR
HLTGDSHCPVCKDKFELGSEAREMPCKHLYHSDCILPWLEQHNSCPVCRYELPTQSSSGA
SCSRSRSTNQNDSSSSSSSSGRTSGRQRRRNPFSFLWPFRSSSSSTGSR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtcggcagacatattggtgcttccaatgtagacagcgggttaggccgcgt
ggacgggagatggagtgcccttactgtgatgctggctttgtggctgaaatggatgatgtc
gatgctctcatgagccaatttgttgggatgtatagtgattttcatcgtgacccaaggttc
gggatcatggaggcaatgtctaccgtgatgcgacatggaatggggagcatgaatcgagag
gctgatgtaagaggaaggccaagcatattatctgaactggaaatggaatttggttcgggg
ccatggttgctcttccgtggccagctccccggtcatctctcagaggccaataatggtttt
gacgttttcgtcaatggacgccgtggtgttggcatgcggagggcagatgttgcagattac
tttgttgggcctggattagaagatctgattgagcagttgactcataatgatcgtcgaggg
ccaccacctgcctctcagtcatctattgatgccatgcctaatgttaggatcactgccagg
catctcactggagactcgcattgccctgtctgcaaggacaagtttgaactgggatcagaa
gcaagagagatgccatgcaagcatttataccactctgattgcatacttccttggctagaa
caacacaattcctgccctgtgtgccgatatgagctgccaacacagagctctagtggtgct
agctgctcacgctcaagatcaaccaaccaaaatgacagttcaagcagctcaagtagcagt
ggaagaaccagtgggcgtcagaggagaaggaatccgttctcgttcctatggcctttccgc
tcatcaagttctagcactggttctcgttag
DBGET
integrated database retrieval system
