Triticum dicoccoides (wild emmer wheat): 119270341
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Entry
119270341 CDS
T07278
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119270341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119270341
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
119270341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
119270341
NCBI-ProteinID:
XP_037408246
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All DBs
Position
3A:complement(704191398..704201051)
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AA seq
706 aa
AA seq
DB search
MPRASGRPPSSEQGPSASPSTPAADSSVAALIDRATSTTAPSVDPALLRAIKSSVRASDG
AVRDAFRLLLSLMAKPHSHVRLLAFSIVDELFMRSKLFRALLADVLDGFVPLAVGFRSNE
QLPPPAASAATLRKAAIQALERWHHLFGVHYRQLRLAVDYLKSSARIQFPGLRAAVEARA
AREARTQEILTAKVEQLRSTIESIKDEIRSTIQEIRNGLDIIRAEYEKFERYADDDDEEE
EIASMAMQSIRTASLMAGQWVPETQENEAVFDALREAYRLLVSKHFSTIQDWISVLVRVN
LADNQFRDSALKEFINVKNEIRAVRGQCNELGLDLDNVRRKKDVQEEDEEDWVEGKIEVP
SPPRVVSTLDVAGSSKDNRKGKSMVKGGSGDVPNDGDRSQEMDPERKRLLAEAPLVSWSS
VLDRWGSNMDAHVNQRGLELESHWGRMDNDAVIPAAKIAELNVHHSVYKEEPVEILPCHA
PLKKGGLCQRRDLKICPFHGPIIPRDARGNPIGRIDGSSDAGGDLLEQKVDIREAGGNPI
TKTNGGSDSESTLEGQEPSTSKMRNINNDTTDIDGAHDLSKMTMDQLAMQAVKNVRKRGM
DDKARERAQRARIRQHNEDVLRQSAIASTPHSAAAYDQPSGTLGQRGRRRGKTKEPTLSS
MLKKKVTAKDRIAGRLLNGRARDATIREASNTEDMTYREAFPNQWQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgcttccggccggccgccgtcgtccgagcagggcccgagcgcctccccctcc
accccggcggcggattcctccgtcgctgccctcatcgaccgcgccacctccaccacggcc
ccctccgtcgaccccgcgctcctccgcgccatcaagtcctcggtgcgcgcctccgatggc
gccgtccgcgacgccttccgcctcctcctctccctcatggccaagccccactcccacgtg
cggctcctggccttcagcatcgtcgacgagctcttcatgcgctccaagctcttccgcgct
ctcctcgccgacgtgctcgacggattcgtcccgctggccgtcggcttccgcagcaacgag
cagctccccccgccggcagcctccgcggccacgctccggaaggccgccatccaggcgctc
gagcgctggcaccacctcttcggcgtacactaccgccagctccgtctcgccgtcgactac
ctcaagtcgtccgcgcgcatccagttccccgggctccgcgcggccgtcgaggcccgtgcg
gcgcgggaggcacgcacgcaggagatcttgactgccaaggtcgaacagttgcggtccacc
attgaatccataaaggatgaaatccggtccaccatccaagagatccgcaacgggctggac
atcatccgggctgagtatgagaaattcgagcgttatgcagacgatgatgacgaggaggag
gagattgcttcgatggcgatgcagagtatcaggacagcgtcgttgatggccgggcaatgg
gtgcctgaaactcaggaaaatgaggcagttttcgatgcattgagggaggcgtaccggctc
cttgtatcgaagcatttcagcaccattcaggattggatatctgtgcttgtcagggtcaat
cttgcagataatcagttcagagattctgcgctcaaggaattcatcaatgttaagaatgaa
atacgcgctgtaagaggccagtgcaatgagcttggtctcgatcttgataatgttcgtagg
aagaaggatgttcaggaggaagacgaagaggattgggtggagggaaagattgaagttcct
agtcctcctagagttgtgagcactctagatgttgcaggttccagcaaggacaataggaag
ggaaagagcatggtgaaaggaggcagtggtgacgtgccaaatgacggtgatagatctcag
gagatggatccagagagaaaaaggctccttgccgaagcccctttggtatcatggagctct
gtcttggaccggtggggttcaaatatggatgcacatgtaaaccagagggggcttgagctc
gagagccattggggtaggatggataatgatgctgttatacctgcagcaaagattgcagag
ttaaatgttcaccattctgtttataaagaagagccagttgagatcctaccatgtcatgca
cctctgaagaaaggaggtctttgccagagaagggatctcaagatatgcccttttcatggg
cccatcatcccacgtgatgcaagaggaaatccaattggcagaattgatggcagttctgat
gcgggaggcgatctgcttgagcagaaagtagacattcgtgaggcaggaggaaatccgatt
actaagacaaatggaggcagtgatagtgaaagtacactggagggtcaggagccctctact
tcaaagatgagaaacataaataatgataccaccgacatcgatggagcacatgatctgagt
aaaatgacaatggaccagctggcgatgcaagcagttaagaatgttcggaaaaggggtatg
gacgacaaagcacgcgaaagagcccagcgtgcgagaatccgccagcacaatgaagatgtt
ctgcggcaatcggctattgcttcaacgccccactcagcggcagcatatgaccagccctct
ggaacattgggccaacgtggtcgacgtcgaggtaagacgaaggaacctacactatcatca
atgctgaagaagaaagttactgcaaaagataggattgcagggaggcttctaaatggtcgt
gctagggatgcaacaataagagaagcttctaatactgaggatatgacctacagggaagca
ttcccaaatcagtggcagtga
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