Triticum dicoccoides (wild emmer wheat): 119270960
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Entry
119270960 CDS
T07278
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119270960
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
119270960
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
119270960
NCBI-ProteinID:
XP_037408848
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Position
3A:13523174..13525568
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AA seq
442 aa
AA seq
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MALRARTPLLLAALAGAVALLLPGAVEARVLLSLDDFGAVGDGIANDTQALVDAWKAACA
TGGTTYLNVPAGESYQIWPVTLAGPCRGEIKLMISGNIIAPEDPEEWSDGDQGRWLHFSG
VGDLSLSGGGIVDGRGQQWWAGSCDDENCTKYRPYEVAPMALHFEDCRDVSVKGITVQNS
QRQHLVFTRCHDVEANYLRVTSPEYSPGTVGVLVVSSTDVHIKHDLFSVGGDCVSIVGNS
SDIRLRAISCGPGLGISIGGLGENQSNDMIHKIKMDTMLLSNTKNGLRIKTYENGCGYAR
KVKFAHITMRNVANPIVIDQHYYSASNSNRGTPCGTPSASAVAVEKIKYIDITGTSATER
AVTFACSDAMPCRRLYLDGVNLKTVGGGSTSAYCYQAFGKHVGDVLPESCLGKEKEDFLQ
LQAPTAAGTPQGDTEDEEDDDW
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgtgcaaggacgccgctcctgctcgcggctctcgccggcgccgtcgccctc
ctgctgccgggcgccgtcgaggcccgcgtcctgctctcgctcgacgacttcggcgccgtc
ggggacggcattgccaacgacacccaggcactcgtcgacgcgtggaaggcggcgtgcgcc
actggcggaaccacctacctcaacgtccccgccggcgagtcctaccagatctggcccgtc
acgctcgccggcccctgccgcggcgagatcaagctcatgatttccgggaacatcatcgcg
ccggaggatccggaagagtggtcggacggcgaccaaggcaggtggctccacttctcgggc
gtgggcgacctgtcgctgagcggcggcggcatcgtcgacggccggggccagcaatggtgg
gcggggtcctgcgatgacgagaactgcaccaagtaccgcccatacgaagtcgcccccatg
gcgctccacttcgaggactgccgggacgtgagcgtgaagggcatcacggtgcagaacagc
cagcggcagcacctggtcttcacccgctgccacgacgtcgaggccaactatctcagggtg
acctcgccggagtacagccccggcaccgtcggcgtcctcgtcgtcagctccactgacgtg
cacatcaagcacgatctcttctccgtaggtggcgactgcgtgtcgatcgtgggcaactcc
tcggatatccggctgagagccatctcgtgcggacctggcctcggcatcagcattggaggc
ttgggcgagaaccaaagtaatgacatgatacacaagatcaagatggacactatgctcctc
tccaacaccaagaacggcctacgcatcaagacctacgagaacggctgcggctacgcgcgc
aaggtgaagttcgcgcacatcacgatgaggaacgtggccaaccctatcgtcatcgaccag
cactactactccgcctccaactccaaccggggaaccccctgcggaaccccgagcgccagc
gcggtggcggtggagaagatcaagtacatcgacatcaccggcacgtcggcgacggagcgg
gccgtgacgttcgcgtgcagcgacgccatgccgtgcaggcgcctgtatctggacggggtg
aacctgaagacggtcggcggggggagcacgtccgcctactgctaccaggcgttcgggaag
cacgtcggggacgtcctcccggagtcgtgcctcggcaaggagaaggaggacttcctccag
ctgcaggccccgaccgccgcgggcacgccgcaaggagacaccgaagacgaagaagatgat
gattggtga
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