Triticum dicoccoides (wild emmer wheat): 119271062
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Entry
119271062 CDS
T07278
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119271062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119271062
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119271062
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119271062
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
NLS_NINJA_AFP
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
119271062
NCBI-ProteinID:
XP_037408926
LinkDB
All DBs
Position
3A:25943924..25948423
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AA seq
274 aa
AA seq
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MSAQGIESMEAKRRRGEKSATSEGAIPLEVLDCAFCFDPLRPPVFQCRVGHVICSSCHHK
LRKKDNCHVCAITGGYNRCIAFDHILESIKVSCSNSIYGCTIKTHYYQQEEHEKSCPHAP
CFCPEPGCGFAGSTAQLQRHLTVDHMLPATAFAYGYSFTLHMQEGMRVLHRKEEGGPLFL
AKFTLVPPFGNAISILCIHPHVVTENHRFECDVDFYSRTMGWHQHSNFQIISTNLSNGFP
GEEASYTFVVPKISSDPHTTTTRLLIRPPKITCP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaggggattgagagtatggaggcgaagaggaggaggggggagaagtccgcc
accagcgaaggtgccatccctctagaggtgctggactgcgccttctgctttgatcccctc
aggcctcccgtctttcagtgtagggtcgggcatgtgatatgttcgtcttgccatcacaag
ctccggaagaaggacaattgccatgtgtgcgccattaccggaggctacaaccgctgcatc
gccttcgaccacatcctcgagtctattaaggtctcttgctccaactccatctatgggtgc
accatcaagacacactactaccagcaagaggagcatgagaaatcgtgtccgcatgcgccg
tgcttctgccccgaacctggttgcggcttcgcaggctcaaccgcccaactccagcgccat
ctcactgtcgatcacatgttgcccgcaactgcgtttgcgtatggatattctttcaccctt
catatgcaggaaggaatgcgtgttctccacaggaaagaagaaggtggcccccttttccta
gcaaagttcacgttggtgccacctttcggcaatgctatctccatcttgtgcattcatcct
catgttgtgacagaaaatcatagattcgagtgcgatgttgatttctacagccgcaccatg
ggatggcaccaacattcaaatttccagattataagcacgaatctctccaacgggttccca
ggggaggaggccagctatacatttgttgtgccaaaaatttcttccgacccgcacaccacc
accacccgcctcctcattcgccccccaaagataacctgtccctaa
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