KEGG   Triticum dicoccoides (wild emmer wheat): 119271397
Entry
119271397         CDS       T07278                                 
Name
(RefSeq) cell division control protein 48 homolog D-like
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119271397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119271397
   03009 Ribosome biogenesis [BR:tdc03009]
    119271397
   04131 Membrane trafficking [BR:tdc04131]
    119271397
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tdc04147]
    119271397
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     119271397
Ribosome biogenesis [BR:tdc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    119271397
Membrane trafficking [BR:tdc04131]
 SNARE
  SNARE associated proteins
   Others
    119271397
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    119271397
Exosome [BR:tdc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119271397
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 AAA_33 AAA_5 AAA_14 CDC48_2 AAA_22 TIP49 NPHP3_N AAA_17 nSTAND3 RNA_helicase AAA_18 Mg_chelatase Viral_helicase1 AAA_28 ABC_tran Parvo_NS1 ATPase_2 NB-ARC AAA_7 Zeta_toxin IstB_IS21 NACHT TsaE Vps4_C DUF815 ResIII
Other DBs
NCBI-GeneID: 119271397
NCBI-ProteinID: XP_037409143
LinkDB
Position
3A:complement(136545787..136548156)
AA seq 789 aa
MASAATSKKAANRLVVEEATTNDDNSVCNLHPATMKKLSIFQGDIVLLKGKHRHNTVCMA
LADDTCDGHKLRINKVARSNLRVRITDVVSVHLCHDAKFGKRVHILPLDDTIEGITGNLF
DAYLKPHFVDAFRPVHKGDLFLMRGGMRSVEFKVMEIDPAVDYCVMAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQIFKSIGVKPPKGILLYGLPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEMVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTINAEILNSMAVTNDHLKTALVGTNPSALRETVVEVPNVSWTDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTTGFSGADITEICQRACKYAIREDIEKDMERQRKGKDTMEVDGGQEEDEVAEI
KAAHFELSMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAVDTSATA
DEDEDDLYK
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggcgagcgcggcaacgtcgaagaaggcggcgaaccggctggtggtggaggaggccacc
accaacgacgacaactccgtctgcaacctccacccggccaccatgaagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacaccgccacaacacggtctgcatggca
ctggccgacgacacctgcgatgggcacaagctcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcaccgatgtcgtgtccgtgcacctgtgtcacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccatcgagggcatcacggggaacctcttc
gacgcctacctcaagcctcacttcgtggatgccttccgcccggtccacaagggcgacctc
ttcctcatgcgtggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccctgcg
gtggactactgcgtcatggcgcccgacacggagatcttctgcgagggcgagccggtcaag
cgggaggacgaggagaggcttgacgacgtcggctacgacgacgtcggtggcatggggaaa
ccgctgactctgatcagggagctcgtcgagctgccactcaggcatccccagatcttcaaa
agcattggcgtcaagcctcccaagggcatcctcctgtacggccttccagggtccggcaag
acgttgatcgcccgtgcggtggccaacgagaccggggccttcttcttccttatcaacggg
ccagagataatgtcgaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccattgctccg
aacagggagaagactcacggcgaggtcgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaggcccgcgcgcacgtcatcgtcatgggcgccacgaaccgtcccaac
agcatcgaccctgccttgaggcgcttcgggaggttcgatcgcgagatcgacatcggcgtg
ccagacgaggtcgggcgtctcgaagtgctccgcatccacaccaaaaacatgaagctggac
gaggacgtcaaccttgagatggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtcatcgac
ttagaggatgacaccatcaacgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcggcacgaacccgtctgcgctacgtgagaccgtcgtggaggtg
ccgaacgtcagctggaccgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgtccagtacccggtcgagcacccggagaaattcgagaagttcggtatgtcgccatcc
aagggcgtcctgttctacgggccaccaggctgcggcaagaccttgctggcgaaggctatc
gccaacgagtgccaggccaacttcatcagcatcaaagggccagagctgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcgacaaggcacgtcagtctgcgccg
tgcgtgctgttcttcgacgagctcgactccatcgctacccaaaggggcggcagagtgggc
gacgccggcggcgcggcggacagggtcctgaaccagctgctcaccgagatggacggcatg
aacgccaagaagacggtcttcatcatcggcgccaccaataggcctgacattattgactcg
gcattactccgtcctggccgtctggaccaactcatctacatccccttgccggacgaggcc
tcgcggcatcaaatctttaaggcctgcctcaggaagtctcccgtggccaaggacgttgac
ctcggtgctctcgcaaggttcaccactggctttagcggtgccgacatcacggagatttgc
cagagggcgtgcaagtacgccatcagagaagacattgaaaaggacatggagcggcagagg
aaggggaaagacaccatggaggtggacggcgggcaggaagaggacgaggtggctgagata
aaggcggctcacttcgagttgtcgatgaagtatgcgaggcggagcgtgagcgacgccgac
atcaggaagtaccaggcctttgcgcagacgctgcaacagtctagggggttcggcactgag
ttccgctttccggcgcagccacaggcggcagaagctgccgtcgacacctccgcaacagct
gatgaggatgaagacgatctgtacaagtga

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