Triticum dicoccoides (wild emmer wheat): 119271879
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Entry
119271879 CDS
T07278
Name
(RefSeq) N-glycosylase/DNA lyase OGG1-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119271879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119271879
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119271879
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119271879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
119271879
NCBI-ProteinID:
XP_037409430
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Position
3A:complement(45614437..45617860)
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AA seq
370 aa
AA seq
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MRPPLLPRVASAASATPPRRQRTVRPPMPPSPALLSSTPPPAAPTETPKPETTHHPTGQT
FLWRRTSLSPLRFTAAVGPHLVSLSHLPDDDRLAFLLHNGDPASPSVATARAALCDYLNA
AVPLADLWVRFTAADARFAEVAARLGGGGARVLRQDPVECLFQFLCSSNNNIARIEKMVW
TLAGYGERLGEVGGFVFHRFPTVERLAQVSEQELREAGFGYRAKYVVGTAKELMAKPGGG
AKWLALLRDRELPEVIEGLCTLPGVGPKVAACIALFSLDKNQAIPVDTHVWKVATQYMLP
ELAGKSLTPKLSIVVADAFVAKFGEYAGWAQNVLFIGQLPAKKLVATEVTSDTAKPTKRK
RATKMVEIQA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccccgctcctcccccgcgtcgcctccgccgcctccgccacgcctcctcgccgc
cagcgcaccgtcaggccgccgatgccgccctcccctgccctcctctcctccaccccaccg
ccggccgcacccacagaaacccccaagcccgagaccacccaccaccccaccggccagacc
ttcctctggcgccgcacctcgctctccccgctccgattcaccgctgccgtgggcccgcac
ctcgtctccctctcccacctccccgacgacgaccgcctcgccttcctcctccacaacggc
gaccccgcctccccctccgtagccaccgcccgggccgcgctgtgcgactatctgaacgcg
gccgtccccctcgccgacctctgggtccggttcaccgccgccgatgcgcgcttcgcggag
gtcgcggcacggctcggcggcggtggcgcacgggtgctcaggcaggacccggtcgagtgt
ctgttccagttcctctgctcctccaacaacaacatcgcgcggatcgagaagatggtctgg
acgctggccggatacggagagcggctcggagaggtcggcggcttcgtcttccaccggttc
cccactgtcgagcggctcgcgcaggtgtcagagcaggagcttcgggaggctgggtttggg
tacagggcaaagtatgttgttggcactgctaaagaattgatggccaagcctggtggaggc
gcaaaatggcttgccttgctgcgtgacagggaacttccagaggtaattgagggtctttgt
acgctgccaggtgttggtccaaaagttgcagcctgcattgctctgttctctcttgataag
aatcaggctattcctgtcgacacacatgtctggaaggttgctacacaatatatgttgcct
gagctagctggcaagagcctgactccaaaactgagcattgttgttgccgatgcatttgta
gccaaatttggcgagtatgctggttgggcgcagaatgttctctttattggccagctacct
gctaaaaaacttgtggccaccgaagttaccagtgacactgcgaaacctaccaagaggaaa
cgtgcgacgaagatggttgaaatacaggcatga
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