Triticum dicoccoides (wild emmer wheat): 119274429
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Entry
119274429 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119274429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119274429
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119274429
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119274429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Trm112p
Motif
Other DBs
NCBI-GeneID:
119274429
NCBI-ProteinID:
XP_037411032
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All DBs
Position
3B:complement(18697711..18699941)
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AA seq
406 aa
AA seq
DB search
MEGAKSNKRAAEARREGQSSAKRRNVNVAVDGGKSNGRQAEVRREGQSSAKTQSVNVAVD
GGESNAQQAQVRREGQSSSTKMQKVTMGLDTLDCPVCSQPLRPPVFQCPKGNLICSPCRD
KLPESKRGAPQRSYGVERIIENTFVPCKHGCLTKITYYDIEEHESRCPLGPCFCPVSGCG
FVGTTVPLLDHLTTLHKLPKMAFKYFVPFELPAQPCSLVLRGGYGRVFLLEVASLESLGH
SVSLVCAGHKDWLGTIRCSVGFSCFEGHYQVSLLEIERSSLSNGLTTQDFYVVPKVSGGQ
TDVMLRIMIDLLYGDDDVPEVEEDDEDNSYVEGEDEDMTTKWRMAITNLGVREDDNDSDE
EDGDDNDEEEDDDMAIIGTSRRGVTIASEKVKDDGKDDREDNQNAN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgctaaatccaacaagagagcagcagaagctcgtcgagaggggcagagcagc
gccaagaggcggaatgtcaacgtggcagtggacggtggtaaatcaaacgggcgacaagca
gaagtccggcgagagggacagagcagcgcaaagacgcagagtgtcaatgtggcggtggac
ggtggtgaatccaatgcgcaacaagcacaagttcggcgagagggacagagcagcagcacc
aagatgcagaaagtcaccatggggttggataccctcgactgccctgtctgctcccagccc
ctcaggcccccggttttccagtgtcctaaagggaatctcatctgctcgccctgccgtgac
aagctcccggaaagcaagcgcggtgctcctcagcgcagctatggtgtggagcgcatcatt
gagaacacttttgtcccctgcaagcatggatgtttgacgaagatcacctattacgacata
gaagaacacgagagtaggtgccctctcgggccatgtttctgtccggtctctggttgcggc
ttcgtcgggacaaccgtgccactgttagaccatctcaccaccctgcacaagctgccaaag
atggcattcaaatacttcgtgccatttgaactccctgcccaaccatgctctcttgttctc
cgcggtggatatggtcgtgttttccttctcgaagtggcatcgctggagtccctgggccat
tcagtctcactagtttgtgctgggcataaggattggcttggcacgatcaggtgctcggtc
ggtttctcatgctttgaaggtcactaccaggtttcattgttggaaattgagaggtcatca
ttgtctaatgggttgacaacgcaagacttctatgttgtgcccaaggtttcaggcggacaa
actgatgtcatgctccggatcatgatcgatttgctctatggtgacgacgatgttcctgag
gtggaggaggacgatgaagacaatagctacgtggagggggaggatgaggatatgacaacg
aagtggaggatggccatcacaaacctgggggtgagggaggatgacaatgacagcgacgag
gaggatggggatgataacgatgaggaggaggatgatgatatggcgataattggtacgtcg
aggcgtggcgtgacaatcgcaagtgagaaggtgaaggacgacggcaaggatgatcgggag
gacaatcagaatgctaactga
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