Triticum dicoccoides (wild emmer wheat): 119274983
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Entry
119274983 CDS
T07278
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119274983
03460 Fanconi anemia pathway
119274983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119274983
03036 Chromosome and associated proteins [BR:
tdc03036
]
119274983
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119274983
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119274983
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119274983
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119274983
FA (Fanconi anemia) pathway
Downstream FA components
119274983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
119274983
NCBI-ProteinID:
XP_037411646
LinkDB
All DBs
Position
3B:96036888..96048902
Genome browser
AA seq
1563 aa
AA seq
DB search
MADLFVQARNTLLEGDGMSGATVDAGEGQLFCTGSGRSVSVSERAIRRARALVGEGVEKA
GNKRKQPFDDVPGAEGESREMDAPFRGGVHNTTVPPVFQTGSGKAVLLGKDSIQKARAIL
GEQPFDHVPDAEGELSEMDAPFRGGVYNTTMPPVFQTGSGKAVLLGKDSIQKARVLLEDV
DSAAGAVQPMFRTGMGRPVPVSRTSIDKARAVLEGQTVAEKGVDGMEQFPLFQTGSGRVV
SVSAASVQKAKSVLKDNNTSEENTESFGRPNQPMMFQTGLGRPAMISERSIERSRAVANE
GDAEKSGHWDTDCQFPMFQTGLGKPVAVSWSSVQKAKSVLEEEKNKTTGRGESSDCATTL
QTETPTSVLMSSSLIMNSRSVTPKEDSAMQVTRTEKNHKDDDHVPLFQTGLGRSIAISKS
SLKRASAVLEPRNIAKELEDEAHLDGAHDTPVFRTGLGRSILASENSRKELPILEAEEAV
KSVNNYNGETFVEEATFQAGIQKFVPQNRISSHKANMLLEQRNFMEKGYQDSGSQLPMFR
TGSGKSVLISESSVQKARAVLEEQGINKDNHKLLNMDKKIPVFASPLKTSCARTVNISSV
GVSRAATLLGLEGNTLSTQFFGHVGDKLGTKINFEQENPEQRLGLASYPTENQVHKEPHR
PFELSNNTVSDSGEHSIRFSTAGGRSMAISSYALERAKSLLGESDLVVSTNNLVSYPLGS
ACNDKMQNSTVAPKEGGSDLSKRRRVSGRTELATFSHQAMSDRKDTGSLGNAVSDIHPTS
ENTNRFHVGSRSTSEIPKIVKPSSRCLSETDNTNDTKDKTRQLHMPAGALVDISNFMGSY
SGNIDHVVNEKRRIGGRNSASSFKRPRSSRFITPISTNRQSSAGVPKLPPTQITSCRTKL
SAYYPFQHKRKIWKEYFGGPPCFNCLAEHIIDEVKLMDAKGAEKYKFHNMNTGAEEFQKL
LIACGASLTYATKEWVNNHYKWIVWKLASLERCYPTKAAGKFLTVANVLDELKYRYDREV
NNGHRSAIKKILEGNALPSLMMVLCISAIYSHPDVNKLEAVGTDGNENSIENKSLLAAKR
NMPAHIELTDGWYALEASLDVALSEQLQKRKLFIGQKLRIWGASLCGWTGPVSFHEASGT
VKLMVHVNGSYRARWDDPLGFCKHVGPPLAFKCIKASGGRVPRTLVGVARIYPVLYKERL
PDGSSIVRSERMERKALQLYHQRVSKIAEDIMSEQDENCASTDDSEEGAKICKMLEQAAE
PEVMMAGLTSEQMISFSSYQAKQKEARQNEVAKKVESALEVAGLSSRDVTPFLKVRVTSL
AHKISATNTIKKEGLITIWNPTEKQKADLVEGQVYIATGLLPSAHCTNILYLHARGSSTM
WKPLASAQAADFQPFFTPRKAVELSLIGEVPLASLSCSEFDIAGVVLHVGDVYLCSNQKR
QWLFLTDGSKFISASQSTEQDDCLLAVSFSCSSASDDGAFFSYALSGNTVGFSNLVKRQK
DQTRRIWVAEATQSSTYTLSHEISKKSHLKEAAACAEKWASSSFDKIQQLKERVLCIIGD
SGG
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctcttcgtgcaagcgcggaacacgctgctcgaaggtgatgggatgtccgga
gcaactgtcgatgcaggagagggtcagctgttctgcactggatcggggaggtcagtgtct
gtcagcgagagggctataaggagggccagggcgttggtcggggagggggtggagaaggct
ggtaacaagagaaagcaaccttttgacgacgtacctggtgcagagggcgaatcgagagaa
atggacgccccatttagaggtggagtgcataacactaccgtgcccccagtgttccaaact
ggatccggaaaagcggttttgctgggcaaggactcgatccagaaggcaagagctatttta
ggagagcaaccgtttgaccatgtacctgatgcagagggcgaattgagtgaaatggacgcc
ccatttagaggtggagtgtataacactaccatgcccccagtgttccaaactggatcagga
aaagcggtcttactgggcaaggactcaatccagaaggcaagagttcttttagaagatgtt
gatagtgctgctggtgccgtacaaccaatgttccgtactggaatgggtaggccggttcct
gtgagccggacctctattgataaggcaagagctgttttggagggacaaacagttgcagaa
aaaggtgtggacggcatggaacagtttccattgttccaaactggttcaggaagagttgtc
tcagtcagtgcggcatctgttcagaaagctaagtctgttttgaaggataataatacaagc
gaggaaaatacagagagttttggtaggcctaaccagcctatgatgttccaaactggttta
ggaagaccagccatgatcagcgaaagatccattgagagatctagagctgtggcgaatgag
ggagatgcggaaaagagcggacactgggatactgattgccagttcccaatgttccaaaca
ggattagggaagcctgttgctgtgagctggagctcagttcagaaggcaaagtcagtattg
gaggaagaaaaaaataaaacaactggacgtggagaaagcagtgattgtgccacaactctt
cagactgaaacaccaacgtctgttttgatgagtagcagtttgatcatgaatagtagaagt
gttacaccgaaggaagatagtgcaatgcaagtcactcgaacagagaaaaatcacaaggat
gatgaccacgtgccattgtttcaaactggactagggaggtcaattgctataagtaagagc
tcacttaagagggcatctgcagttctggagccaaggaatattgcaaaggaattggaagat
gaagctcatttagatggtgcccatgacactccagtgttcagaactggattaggaaggtct
atcttagcaagtgagaactctagaaaggaattgcctatcttagaggctgaagaagcagta
aaaagtgtaaacaattacaacggggaaacctttgttgaagaggcaacgttccaagctgga
atacaaaagtttgtaccccaaaatagaatttcaagccataaggccaatatgcttttggag
caacgaaacttcatggagaaaggataccaagactctggaagtcaactgccaatgtttcga
accggatctggaaagtcggtcttgattagtgaaagctcagtacagaaagcaagggctgtt
ctggaggaacaaggcataaacaaagataatcataagctccttaacatggacaaaaaaatt
cctgtgtttgcgtcacctctcaagacaagctgtgcaagaacagtaaatatatcttcagtt
ggcgtgtctcgagctgctactttgttgggcttggaggggaataccctatcgacacaattt
tttggacatgtgggggataagctgggcacaaaaataaattttgagcaggaaaatccagaa
cagaggcttggtcttgcatcttatccaacagaaaaccaagtgcacaaggaaccacaccgg
ccatttgagctttctaataacacagtttctgattctggtgagcattctatcagattcagt
accgccggaggcagatcaatggctatttctagttatgcacttgaacgcgcaaaaagcctt
ctgggtgaatcagatctcgtggtttcaacaaataatttagtaagctaccctttgggatct
gcttgtaatgataagatgcaaaattcaactgttgcgccaaaagaaggcggatctgattta
tcaaaaagaagaagggtcagtggaagaaccgaacttgcaacattttcccaccaggcaatg
tctgataggaaggacactggatccttgggaaatgctgtatctgatatccatccgactagt
gaaaacaccaataggtttcatgttgggagtcgttcaaccagtgaaattccaaagatcgtg
aaaccttcttccaggtgtttatctgaaactgacaacacaaatgacactaaagataagacc
cgacaactccatatgccagctggagcgttggttgacatcagtaacttcatgggttcatat
tctggaaatattgaccatgttgttaatgagaagagaagaattgggggaagaaactccgca
tcttcctttaaacggccccgctcttccaggttcatcacgcctataagcaccaacagacag
tcctctgctggagtacccaaactaccaccaactcagatcacttcctgtcgaacaaagctg
tctgcatattatccttttcaacataaaaggaaaatttggaaagagtatttcggtggtcct
ccctgcttcaattgtttggcggaacatataatagatgaagtgaagctcatggatgcaaaa
ggagctgagaagtacaagtttcacaatatgaatactggtgctgaagaatttcagaagttg
ctgattgcctgtggggcttcattgacatatgcaactaaagaatgggtgaacaatcactat
aaatggatcgtatggaaacttgcttcacttgagagatgctatccaactaaagctgctggc
aaattcttgacagttgctaatgttttagacgagctgaagtacaggtatgacagagaagtg
aacaatggccatcgatcagccataaagaaaattttagaaggaaatgctttgccatctttg
atgatggtgctgtgcatttcagctatttattcccatcctgatgtaaataagttagaggct
gtcgggacagatggaaatgaaaacagtatcgaaaataaaagtttgttagctgctaaaaga
aacatgcctgcacacattgaattaactgatggatggtatgcactagaagcgtcattagac
gtggcactttcagaacaactacagaaaagaaagctttttataggacaaaagcttcggata
tggggagcttctttgtgtggttggactgggcctgtgtcatttcatgaggcatctggcacc
gtcaaattgatggtccatgtgaatggcagttatcgtgcaagatgggatgatcctttggga
ttctgcaagcatgttggacccccactggcattcaagtgcataaaagcttctggtggccga
gtccctaggacactggtaggagttgcaagaatatatcctgttttgtacaaggagaggttg
cctgatggtagttctattgtgagatctgaaaggatggaaagaaaggcgctacaactgtat
caccagagagtatctaagatcgcagaagacattatgtctgaacaagatgaaaactgtgcc
agcactgatgacagcgaggaaggggcgaaaatttgcaaaatgttagagcaggcggctgag
cctgaagttatgatggctggcttgacctcagagcagatgatatctttctcatcttatcaa
gcaaagcaaaaggaagctaggcaaaacgaagtagctaagaaggtggaaagtgctctggaa
gttgctggccttagttcaagagatgttacgccatttttgaaagtgagggtgacgagcctt
gctcacaaaatctctgctacaaataccatcaaaaaggaagggctaataacaatttggaac
cctactgagaagcagaaagctgacctggtggagggacaagtctacatcgccacaggattg
ctgccttctgcccactgtacgaatattctttacttgcatgctagaggatcatctacaatg
tggaagccattagcatcggcacaggctgcagattttcaaccattttttaccccacgtaag
gcggttgagctgtcattgattggtgaggtaccacttgcaagtctttcttgcagtgaattt
gacattgcaggtgttgttttgcatgtcggcgatgtttacttatgcagcaaccagaaaagg
cagtggctctttttgacagatggatctaaatttatctcggcatcgcagtccacagagcaa
gatgattgtcttctagcagttagcttttcttgctcatctgccagcgatgatggtgccttt
ttcagttatgccctttctggaaatacagttggtttcagtaacttggtcaagcgacagaag
gaccagacaaggcgcatatgggtagccgaggcaacacagagctctacatacactctttcc
catgagatatcaaaaaaatcgcatcttaaggaagctgcagcatgtgctgagaaatgggct
tcaagttcttttgataaaatccagcagctaaaggaaagagttttatgcataattggtgat
agcggtggctga
DBGET
integrated database retrieval system
