Triticum dicoccoides (wild emmer wheat): 119275036
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Entry
119275036 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119275036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119275036
03009 Ribosome biogenesis [BR:
tdc03009
]
119275036
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119275036
Spliceosome [BR:
tdc03041
]
Complex A
U1 snRNP components
U1 related factors
119275036
Complex B
119275036
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Helicases
119275036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
QCR10
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
119275036
NCBI-ProteinID:
XP_037411705
LinkDB
All DBs
Position
3B:105640372..105644410
Genome browser
AA seq
496 aa
AA seq
DB search
MSRFDGRAADPSSYRDRRSEGAFGGGTRAFAPSGKPDAAAAAAAAELDGLPRFEKNFYVE
VPAVAGMTAEEVEAYRRRREITVEGNDVPKPVRDFRDVGFPEYVLQEITKAGFTEPTPIQ
SQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAV
QIQQETTKFGASSKIKSTCIYGGVPKGPQVXXLVLGVEIIIATPGRLIDMMESHHTNLRR
VTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVELLARTFLFDPYKVI
IGSEELKANHAICQHVEILSESQKYNKLVNLLEDIMDGSRILVFMDTKKGCDQITRQLRM
DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE
DYVHRIGRTGRAGATGTAYSFFTAANARFAKDLISILVEAGQKVSPELANMGRGAPPPSL
GYRDRYRGHGGGRSWS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttcgacggccgtgcggcagaccccagctcctaccgcgaccgccgcagtgag
ggcgcgttcggtggcgggacgagggcgttcgcgccgtcgggcaaaccggatgctgccgcc
gcggcggccgcggccgagctggacgggctgccgcggttcgagaagaacttctacgtggag
gttcccgcggtggccggcatgacggcggaggaggttgaggcctaccgccgccgccgggag
atcaccgtcgagggcaacgacgtgcccaagccggtgcgcgacttccgcgacgtcggtttc
ccagaatatgtgttgcaagaaatcacaaaagctggctttacagaacctacccctatccag
tcacaaggttggccaatggcactgaaggggcgtgatcttattggcattgctgaaacagga
tctggaaaaacacttgcttaccttttacctgccattgttcatgttaatgctcagcctatt
ctagctcctggtgatggtccgattgttcttgtgttagcccctacacgggaacttgctgtc
cagatacagcaggagacaacaaaatttggtgcctcatcaaagataaaaagcacatgcata
tatggtggtgtcccgaaaggtcctcaagttcnnnttcttgtgttaggtgttgaaattatt
atagccacgccaggaagactaattgatatgatggaatcacatcacacaaatttgcggagg
gtcacataccttgttttagacgaggcagatcgaatgctagacatgggttttgaacctcag
attaagaaaattgtttctcagattcgtccagatcgacaaacactttattggagtgctacc
tggccaaaggaagttgagctcctagcaaggactttcctttttgatccatacaaggttata
attggttctgaagaactgaaagctaatcatgctatttgtcagcatgtagagatattatct
gagagtcagaagtataacaagttggtcaatctactggaggatataatggatggcagccga
attttagtattcatggacaccaagaaaggatgcgatcagatcacccgacagcttcgaatg
gatggttggcctgctctgtctatccatggtgacaagagccaagctgaaagagattgggtt
ctttctgaattcaagtcagggaaaagccctattatgacagctactgatgttgctgctcga
ggcttagatgttaaggatgtcaagtatgtcattaactatgactttccggggtctctggag
gattatgtccatcgcattggtcgaactggcagagctggagcaacagggacagcctacagc
tttttcacggctgctaacgccagatttgccaaggatcttattagcattttagttgaagct
ggacaaaaggtcagccctgaattggctaatatgggccgtggtgcaccacctccttctttg
ggttatcgtgatagatacagagggcatggaggtggtcgttcatggagctga
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