Triticum dicoccoides (wild emmer wheat): 119275614
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Entry
119275614 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119275614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119275614
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119275614
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119275614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
119275614
NCBI-ProteinID:
XP_037412390
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All DBs
Position
3B:224375049..224377684
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AA seq
327 aa
AA seq
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MDVDSVECLSLPDAAMDADDVGLALHPHGGLLAAATASRPAAYPKAGAGAGGIVAPGSSV
HELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESL
ELPCKYYSLGCPEIFPYYSKIKHEAMCGFRPYSCPYAGSECSVTGDIPYLVNHLRDDHKV
DMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
DENEARNYSYSLEVGANGRKMVWEGTPRSVRDSHRKVRDSHDGLLIQRNMALFFSGGDRK
ELKLRITGRIWKETQTPDGACVPVLCS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacagcgtcgagtgcctctcgctgcccgacgccgccatggacgcggacgac
gtcggcctcgccctccacccgcacggcgggctcctcgccgccgccaccgcctcccgcccg
gccgcctaccccaaggccggcgccggcgcggggggcatcgtcgcgccggggagcagcgtg
cacgagctgctcgagtgccccgtctgcaccaactccatgtacccgccgatccaccagtgc
caaaatggacatactctgtgttccacatgcaaagctagggtacacaatcgttgccctact
tgccgacaagagctcggtgatatcaggtgtttggcactggagaaagtagccgaatcgctt
gagcttccctgtaagtactactccttgggttgcccagaaatcttcccatactacagcaag
ataaagcatgaagcgatgtgcggctttagaccatacagttgcccctatgctggttctgag
tgttctgtgactggtgacattccttaccttgttaaccatttgagggatgaccacaaagtt
gatatgcacagcggctgcacattcaaccatagatacgtcaaatcaaacccaagagaagtc
gaaaacgccacctggatgctgacggtgtttcactgtttcgggcagtacttctgcctgcac
tttgaggccttccagcttgggatggcaccagtgtacatggccttcctgcgtttcatgggg
gacgagaatgaggcacggaactacagttacagcctcgaggtcggcgccaatggcaggaag
atggtatgggagggcacccccaggagcgtgcgtgacagccaccggaaggtgcgtgacagc
catgatggtctcctaatccagaggaacatggcattgttcttctcgggcggcgaccggaag
gagctgaagctaaggatcaccggccggatctggaaggagacgcagaccccggatggcgcc
tgcgtaccagttctctgtagctaa
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