Triticum dicoccoides (wild emmer wheat): 119275713
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Entry
119275713 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119275713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119275713
03036 Chromosome and associated proteins [BR:
tdc03036
]
119275713
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119275713
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119275713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
119275713
NCBI-ProteinID:
XP_037412508
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All DBs
Position
3B:complement(241549618..241556468)
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AA seq
909 aa
AA seq
DB search
MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTTTNNPFGSPTTAFGAQTGTTSPFGA
TSSTAGAFGQPSAPAFGATSTPAFGAAPIGGFGQPSTPAFGTPSSSPFGSSTPAFGASPA
PAFGAGATSSGFGSGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGNSTFGATTTPA
FGTTTTPSFGATTTPAFGSTSTSLFGASSTPAFGSTPFGSTTTPSFGSSGTTTFGASSAP
AFGASSMPANAFSFGSSPSFGQTASATGSTPFGTTPSPFGAQTSPFGSQTAAPAFGQASF
GNQSGGTRVQPYVQTPDPDSATSGTQPAAKLNSISAMPAYKEKSHEELRWEDYQRGDKGG
PNSSVTPVANSFPTPSPSFQTNPPANPFAKPSTGGFGATPNPFSSPTVTPFGQTSSSAFS
ANTSPSLFANTTPSLFSTPSTTPNLFNNSLSISNNTQSAGLFQSSPAIAPFSQSFSQQSS
TPAFSTGIFNTPNPGMTGGLFGNTSSPFLTSTFQQSAPVQQTPSLFSFQPQTQPASTGGF
TGFSNTMNLAPFGQQTTSQSNMVMQPTLVSNPFGTLPAMPQMSIGNGGSAPSIQYGISSL
PVPEKPLPSRTVSMVVPRHLSQRRIKLLPRKYNQTSDGKVPFFADDEESPATPKADAFFI
PRENPRSLIIRPTDQWRSRSAADRQSVLRDSTDLDKHNDALVGKERGKAVVSPARSGSVE
NGTYRDEHHQALPEAHANGSSVEKLIPKLSQADYFTEPSLEELAAKERAEPGYCSRVRDF
VVGRQGYGSIKFMGETDVRGLDLESIVEFNNREVIVYKDDNEKPQVGEGLNKAAVVTLLN
IKCVNRKTGDQYTEGPRVDKYKEMLVKKAEEQGVEFISFDAAKGEWKFKVKHFSSYGFAE
AEVGLVDSL
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaatccgttcgggcagtcgtccgctagcgcttttgggcagacctcc
agcaaccccttcggggcccaatcggggttcggccagaccagcaccaccaccaacaatccc
ttcggcagcccgaccaccgccttcggtgcgcagaccgggaccacctcgcctttcggcgcc
acctcctccaccgccggcgcgtttggccagccatccgctccggcgttcggggctacatcc
accccggcgtttggggccgcgccaattggcggatttggccagccatccacgccggcgttc
ggcaccccgtcgtcctctccgttcgggagctccacgccagcctttggtgcgtcgccagcc
cctgcgtttggcgcgggcgccacatcctccggctttggcagcggatctttgtttggacaa
aagccaagttttggtggttttggatcatcccctagccagtctagtcctttcggtagcaca
tttcagcaaacacagccaacatttggcaacagcactttcggcgccacaactacaccggcc
tttggcaccacgacgacgccatcctttggtgccacaaccaccccagcgtttggctcaaca
tcaacatccctatttggggcttccagcacaccagcatttggctccacacccttcggttca
accacgactcctagttttggatcctcaggaaccacaacatttggtgcgagcagtgctcca
gcttttggagcttcaagcatgccagcaaatgcttttagttttggttcttccccatccttt
ggacaaacagcatctgcaaccggaagcactccgttcggaacaactccttcgccttttggg
gcacaaacgtctccatttggctcgcagacagcagcaccagcatttgggcaagcttcattt
ggaaatcaatctggaggaaccagagtacagccttatgtgcagacaccagatcctgacagt
gctacaagtggtactcagcctgctgcaaaacttaattccatatcagccatgcctgcatac
aaagagaagagtcatgaagagttgaggtgggaggattaccagcgtggagacaagggtgga
ccaaactcttctgtaactccagtggcgaacagctttccaactccgtcgccaagttttcaa
acaaatccgccggcaaatccatttgctaagccctctacaggtggttttggtgccactccg
aacccattttcgtcgcccacagttaccccatttggacaaacaagcagttctgcattttca
gcaaatacctcaccatctctatttgcgaatactactccttcattattcagcacgccatcg
acaaccccaaatcttttcaataatagcttatccattagtaataatactcaatcagctggg
ctgtttcagtcttcccctgcaatagcgccatttagccagtcgtttagccagcaatcaagc
accccagctttctccactggtatattcaacacaccgaaccctggaatgaccggagggctg
tttggcaacacatcttcaccttttctaacatcaacatttcaacaatctgctcctgttcag
cagactccaagcttattctcattccaacctcaaacccaaccagcttctacaggtggattc
actggtttttccaacacgatgaatctggctccatttggacagcaaaccaccagccagtcc
aatatggttatgcagccgactcttgtttcaaatcccttcgggacacttccagcaatgcct
cagatgtccattgggaatggtggatccgcaccctctatccagtatggcatatcaagtttg
ccggttcctgagaagcctcttccaagcagaacagtatccatggtggttcctaggcatttg
tcgcagagaaggataaaactgctgccacgaaaatataatcagacatctgatgggaaggtt
ccgttttttgccgatgatgaagaatctcctgcaacaccaaaagcggatgccttttttatc
cctagagagaacccgaggagtctgataatccgtccaactgaccagtggcgttcacgtagt
gcggctgacaggcaatcagtactgagagattcaactgatcttgacaaacataacgatgct
ttggttgggaaggagcgcggcaaggctgttgtgtcaccggctcggtctggttcagtggaa
aatggcacctaccgtgatgagcaccaccaggcattacctgaggcgcatgcgaatggttct
tctgttgagaagctcatacctaagctatcccaggcagattacttcacggagcctagttta
gaggagcttgccgccaaagaacgtgctgaaccaggttactgcagtcgggtgagagacttt
gttgttggacgtcaaggctacggcagcatcaaattcatgggagaaactgatgtaaggggc
cttgatctggaatcaatcgtggaattcaataaccgtgaagtgattgtgtacaaggacgat
aacgaaaagccccaggttggtgagggcctgaacaaagctgctgtcgtgactcttttgaac
atcaagtgtgttaacaggaagacaggcgatcagtacacggagggtccaagggtagacaag
tacaaggagatgctggtgaagaaggctgaggagcagggtgtggagttcatctcgtttgac
gctgcaaagggtgagtggaagttcaaggtgaagcacttcagctcctatggttttgctgaa
gctgaagtaggcctggtcgattccctgtag
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